Pandoraea sputorum: NA29_23200
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Entry
NA29_23200 CDS
T03554
Name
(GenBank) hypothetical protein
Organism
pspu
Pandoraea sputorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIG
Autotransporter
He_PIG
TIG_SUH
Big_9
Cadherin_5
SprB
NtrZ
DUF3917
Motif
Other DBs
NCBI-ProteinID:
APD12566
LinkDB
All DBs
Position
complement(4338055..4343721)
Genome browser
AA seq
1888 aa
AA seq
DB search
MNAPGAASRFSHVRSGLCAVWFHCLRVLVALLLFGFASSAMAAVCYVWNAGPAGASSYTL
STQTTAGFQNCDPFYGDFDAGGIYSDASQGTSDIPSSTGDGSKLTIDTNAVLPEDVVVFT
PSSTTTQTQWTFKLFGSDGSSRDLVINRERGGPAISGISPSSRPSATGGSVTITGNNFVN
NATVTFGGTAGTGVTVVSPTQVNVTAPPHAVGTVDVVLTTSGGSATATSAFTFLPLPVVT
SVSPTQGSTGGGNSVTINGTDLGGATGVTIGGNAAAITSNTASQITVTAPGGSAGTVDVL
VTTNGGQSAISASAKYTYVSTPTVASVTQNEGPLGGGNTVTITGTNFVVGSTTVSFGSTP
ATGVVVNSTTSLTATVPAGAAGTVDVSVTTAAGTSPPVPGDRYTYLATPTLSAVSPSAGP
TGGSTSVALTGTGFTAGMTVTFGGTSASGLVVNSATSASVNAPAHAAGSVDVVVSTGGGS
VTLPSSYKYVAAPTVTGVLPPTGSASGGTPVTINGTNLSDVTDVRFGATSAAFTVTGPGS
ITTTSPGGTGTVDITVTSPGGTSATGAADQFTYIPGPTVSSISPTTGPAAGGTSVTITGA
NFTAASTVAFGSTAATSVTFMNSTTLNATAPAGTGTADVRVTTANGTSPIVSGDVFTYIG
APTITSISPTNGPGGGGTNVTINGTGFTGATAVTFGGTAATTFNVTSSTSMTAQAPAGTG
TVDIRVTTPGGTTAMSAADQFTYVDAPTVTSISPAAGPTAGGTTVTINGTNLSNVSGVKF
GATNAISFSGGTGTQLTAISPAGAAGVLDVTVTTPGGTSATGAGDRFTYVAAPTAAPVSV
SVPFNSAAAPVNVDLSSGASAVTLVSVGTGPLHGQATVSSNTSLTYRPTAGYSGGDSFTY
TLTNVGGTSTAGTVTVTVGTPTITYSPPTTLQASVGALYSSTALAVASGGSTPYSYSITT
GHLPQGLTLDSNGTLHGTPTSVDVQDITVTATDNATPGGPYSATSGTIRITTVAPTIAFS
TTSLTAVPSGTAYNRSVTASGGTAPYSYSIVGGSLPPGVSMNTATGAITGDLKNVGSFTF
TLQAKDANQFPAQVVLTLQVTAPVLAVTTTALTDAAVGTSYTQTLTASGGVTPYTFTATG
LPSGLSVTGNAISGTPTQTGTFTVVVRMTDSTAGVGAPYFVDKTLSLTVNASPMTLSPST
LTTPIAGQGYTQTLSASGGTAPYRYAVTSGTLPTGLTLDPATGILSGTPTSTGASNFTVT
ATDSSTGPGTPLTVAKAFAFNITGQVASAPAVQTQTLSNAPLRIRATANAVGAPFTRIAI
ATPPQSGTAVVEGEDIVYTPTANTNGDVAFTYTLTNAVGTSAPISVTVSVKAVPVTAASL
EASVAANGTADLDITSGATGGPFTGANLISISPPNAGTVTIISTAAATPAAAGVTRAATL
PTGNTYTLRFVPAAAFAGMAVITYTISNANATSAPGTVKVTVAPRKDPSTDPDVTGLIGA
QVEAARRFATTQIGNYNQRLEALHGKGRAPSSNGLNVVLPSSDRGSSRDLSRCQDIAGIT
DRDACLRGEVSPTALSKAKSLDVRDKSVGASGVATGESGDGPNLPGVGAGDDQRFAYWTA
GTVDFGFANTAAQRSGFKFTTGGVTMGADYRFSDQFSLGAGVGYGHDATDIGSSGTRSTG
DSYSGAIYASFRPMPTLFVDAVAGYGTLSFDSRRWVVDANDFATGKRKGQQFFGSLSAGY
EYRTDDWLFSPYGRLTASRSTLDQYSESGAGLNALTYFKQNVNTLSGTLGVRAGFAKATR
IGTFSPYVRVELQHDFNGQSLAGLAYADIASSGPVYFVPGSPYGSDRVQVGAGTKLRTGT
LVFGLDYSVTTGMGGLQQGFRLTFTAPF
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccggcgcggcctcgcgcttctcccatgtgcgctcaggtctgtgtgccgtt
tggttccattgcttgcgcgtgctggtcgcgctgttgctgttcggctttgcgtcgtcggct
atggctgcggtgtgctacgtgtggaatgcaggcccggccggtgcaagttcttacacgctg
tcgacacaaaccacggcagggttccagaactgcgaccctttttatggggacttcgacgcc
ggcggcatttattcggacgcgagtcaggggacgtccgatattccttcgtcaaccggagac
ggttccaagctaacgatcgataccaacgctgtacttcccgaggacgtcgtggttttcaca
ccgagctcgacgacgacccagacgcagtggactttcaagctgtttggcagcgacggaagt
tccagagatctggtcatcaaccgtgagcgcggtggtccggcaatctcgggcatttctccc
tcctcccggccttctgccacaggcggttcggtaaccatcaccggtaacaacttcgtcaac
aacgcaacggtgacgttcggtggaacggcgggcaccggggtgacggtcgtcagccccacg
caggtcaatgtgaccgcgccgccgcacgccgtcggcaccgttgacgttgtcttgaccacc
tccggcggttcggcaacggcgaccagcgcgtttacctttctcccgttacccgtcgtgaca
tccgtgtcgccaacgcaaggatcgacaggcggtggcaacagcgtgacgatcaacggcacc
gatctcggcggggcgacgggcgtgaccatcggcggcaacgcggcagcgatcacctcgaac
acggcgtcgcagatcacggtcaccgcgccggggggaagtgctgggacggtcgacgttctg
gtgacgacgaatggcggccagagcgccatcagtgcttcggcaaagtacacatatgtcagt
acaccgacggtggcctcggtgacgcagaacgaggggccgctcggcggtggcaacacggtc
accatcacgggcactaacttcgtggtcggttcgaccacggtcagcttcggtagtaccccg
gcgacaggcgtcgtcgtgaacagcaccacgtcgctgacggccaccgttccggcaggcgcg
gcgggcaccgtcgacgtttccgtcacgaccgctgcgggtaccagcccgcccgtgccgggc
gaccgctatacctatctcgcgacgccgacgctgtcggccgtctctccgagcgccgggccg
actggcggttcgacgtcggtggcattgactggcacaggatttaccgcgggcatgaccgtg
acgttcggcggcacgtcggcatccggcctcgtcgtgaacagtgcgacgtcggcgagcgtc
aacgcgcccgcgcacgctgcgggcagtgtcgatgtcgtggtgagcacggggggcggcagt
gttacgctcccctccagctacaaatatgtagccgcgccgacggtgaccggcgtcctcccg
cccacggggtcggcgtcgggcggcacgcccgtgacgatcaacggcaccaacctgagcgat
gtcacggatgtcaggtttggcgcgacgagcgccgcgttcacggtcaccggccccggctcg
attaccacgacgtcacccggcgggaccgggaccgtggatatcacagtgacgtcgccgggc
ggtactagcgccacaggcgcggccgatcagttcacgtatatcccggggccgaccgtctcg
tcgatttcgccgacaaccggtcccgcagcgggcggtaccagcgtgacgatcaccggtgcg
aatttcacggcggcctcgacggtggcgttcggttccacggcggcaacgagtgtcaccttc
atgaactcgaccacgctcaacgccacggcccccgcagggaccggcacggccgatgtccgc
gtgacgaccgccaacggtacctcgccaatcgtgtcgggcgacgtattcacctacatcggg
gcacccaccatcacgtcaatctcgccaacgaacggtccgggcgggggcggcacgaacgtg
acgatcaacggtacgggcttcacgggcgctacggcggtgaccttcggggggacggccgcc
acgacgttcaatgtgaccagcagcacgtcgatgacggcgcaagcgcccgcaggtacgggc
acggtcgacattcgtgtgacgacgccgggcggcacgaccgcgatgagcgctgccgaccag
ttcacctacgtcgacgcgccgaccgtgacgtcgatttcgccggccgcaggcccgacggcc
gggggaacgaccgtgaccatcaacggcactaatctatccaacgtgtcgggcgtgaagttc
ggcgcaaccaacgcaatttcgttcagcggcggtacggggacgcaacttaccgccatttcg
cctgctggcgcggccggtgtgctggatgtgacggtcaccacaccgggcggaacgagtgcc
acgggcgctggcgatcggttcacgtatgtcgctgcgccgacggctgcccctgtctcggtg
tcggtgccgttcaacagcgctgccgcacccgtcaacgtcgacctgtcgagcggggcgagc
gccgtgacgctggtgagcgtcggcacaggtccgttgcacggacaggcaaccgtcagcagc
aacacctcactcacttaccggcccacggccgggtactcgggaggtgactcgttcacgtac
acgctgacgaacgtcggtggcacgtccaccgccggtacggtgacggtcaccgtcggaacg
ccgaccatcacgtactccccgccaaccacgttgcaggcgagcgtgggggcgttgtattcg
tcgacggcactcgctgtcgccagcggcggctcgacaccgtatagctactccatcaccacc
ggacacctgccgcagggtctgacgctcgattcgaacggtacgctgcatggcacgcccact
tcggtcgatgtgcaggacatcacggtgacggccactgataacgcaacgcccggcggtcct
tactcggcgacgagcggcacgatccggattaccacggttgcgccgacgattgcgttcagc
accacgtcgctgacggcggtgcccagcggcacagcatacaaccggtcggtcacggcatcg
ggcggtaccgctccctatagctactcgatcgtcggagggagtctgccgccgggtgtcagt
atgaacaccgcgacgggggcaatcacgggtgatctgaagaatgtcggcagcttcacgttc
acgctgcaagcgaaggatgcgaatcagttccccgcgcaggtcgtactgacccttcaggtc
acggcaccggtgctggcggtcaccacgaccgcgctgaccgatgcggccgtcgggacgtct
tacacccagacactcaccgcctcgggcggcgtcacgccctacaccttcacggcgacagga
ttgccgtccggtctgagcgtgacgggcaacgcgatctccggcacaccgacgcagacgggc
acgttcacggtggtggtccgcatgacggacagcacggcaggggtcggcgcaccgtacttc
gtcgacaagacgctgtcgctgacggtgaatgcgtcgccgatgacgctctcaccgtcgacg
ctgaccacgccaattgccggacaaggctatacgcagacgctatcagcctcggggggcacg
gcgccgtatcgctacgccgtcacgagcgggacgctgccgacagggctgacgctcgatccg
gccacggggattctgagcggcacgcctacatcgaccggtgccagcaacttcaccgtcacc
gcgacggattccagcaccggtcccggcacgccgctcacggtagcgaaggcgttcgcgttc
aacattaccggccaggtcgcttcggccccggcggtgcagacacaaacgctgtcgaacgca
ccgttgcgcattcgtgcgacggccaatgccgtaggtgcaccattcacgcgtattgccatc
gccacgccgccgcaaagcggtacggcggtcgtggaaggggaggacattgtctacacgccg
acggcgaacaccaacggcgacgtggcctttacgtacacgctgacgaacgccgtgggcacg
tctgcaccgatcagtgtgacggtgtcggtgaaagccgtgccggtcacggcggcctcgctc
gaagcctcggtggcggcgaacgggacggccgatctggacattacgtccggtgcgaccggt
ggtccattcaccggggccaacctcatatcgatttccccgccgaatgcgggaaccgtcacg
atcatctcgacggccgcggcgacgccggcggccgctggcgtgacacgagcggctactttg
ccgacgggcaacacgtacacgttgcgcttcgtgcctgctgcggcgtttgccggcatggcg
gtgatcacgtacacgatctcgaatgccaatgcgacatccgcgccgggcaccgtgaaggtc
accgtcgccccgcgtaaggatccgagcacggacccggacgtcactggccttatcggtgcg
caggtcgaagcggcgcggcgcttcgccacgacgcagatcggcaactacaaccagcgtctc
gaagcgctgcacggcaagggacgcgcgccgtccagcaatggactgaacgtggtgctgccg
tcttcggatcgcggcagcagccgtgatctgtcgcgttgccaggacatcgcaggcattacc
gatcgcgacgcctgtctgcgcggcgaagtcagcccgacggcactgagcaaggccaagagt
ctcgacgtgcgcgacaagagcgtgggtgcgagcggcgtggcgaccggcgagtcgggagac
ggtccgaacctgcccggcgtcggcgcgggagacgaccagcgcttcgcctactggacggcc
ggtacggtggacttcggtttcgccaacacggcggcccagcgctcgggcttcaagttcacg
accggtggcgtgacgatgggggcggactatcgcttctcggaccagttctcactcggcgcg
ggcgtgggttatggccatgacgccacggatatcggcagttcgggcacgcgaagcacgggc
gacagctacagcggcgcgatttacgcgagcttccgtccgatgccgacgttgttcgtcgac
gccgtcgcgggctacggcacgctcagtttcgactcgcgtcgctgggtcgtcgatgcgaac
gacttcgccaccggcaagcgcaaagggcagcagttctttggctcgttatcggcgggttat
gaataccgcaccgacgattggctgttctctccgtacgggcgtctgacggcatcgcgctcc
acgcttgatcagtacagcgaatccggtgcggggttgaatgcgctgacgtacttcaaacaa
aacgtcaacacgttgtcgggcacgctcggtgtgcgcgccggcttcgcgaaagcgacgcgc
atcggcacgttctcaccctatgtgcgtgtggagttgcagcacgatttcaacgggcagagt
cttgccgggctggcctatgcagatatcgcgtcgagcgggccggtgtacttcgtgccaggc
agtccgtatggcagcgatcgcgtgcaagtcggtgcgggaacgaaactgcgtacgggcacg
ctcgtcttcgggctggactacagcgtaacgacagggatgggcggattgcagcagggcttc
cggctgacgttcaccgcaccgttctga
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