KEGG   Punctularia strigosozonata: PUNSTDRAFT_123034
Entry
PUNSTDRAFT_123034 CDS       T03131                                 
Name
(RefSeq) transcription factor Tfb2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
psq  Punctularia strigosozonata
Pathway
psq03022  Basal transcription factors
psq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PUNSTDRAFT_123034
  09124 Replication and repair
   03420 Nucleotide excision repair
    PUNSTDRAFT_123034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psq03021]
    PUNSTDRAFT_123034
   03400 DNA repair and recombination proteins [BR:psq03400]
    PUNSTDRAFT_123034
Transcription machinery [BR:psq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PUNSTDRAFT_123034
DNA repair and recombination proteins [BR:psq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PUNSTDRAFT_123034
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 18877617
NCBI-ProteinID: XP_007388743
JGI: 123034
UniProt: R7S262
LinkDB
Position
Unknown
AA seq 467 aa
MAVPAVVEEGALQQLPHSLLPFLQAQSQGTLTRLWGRPSACLSVFRLLRPLDQQLVMNLL
WLESAVPAQTMQQWIVPGGNNRKLYHASLEILSRLHILSGNTQVRLQLNSTWKASLRAAI
TGGTVATSSGSFGIPAERGAKDSMDKDGLDAFALERWETILHFMVSSGTAHNPPRPSAGV
LFLLQRSGLMGGGGNPQITSAGFQFLLHEPHAQLWELLLQYLRMAEERQMDLVEVLSFIF
MLSTTELGREYSTENLSDTQKAMLEDLRDYGLIWQQKPTSKRFSPTRLATTLTSSSPPLP
TSGSGVSEGFIVLETNYRLYAYTDNPLQTAVLALFTTLRSRFPNLVVGQITRESVKRALQ
SGISAEQIISYLSTHAHPQMRKNNPLIPVTVQDQIRLWELEKNRLKSQEGFLYTEFASQG
DYEYVLNYARELNVVLWENPVKRCFFGSMEGHANIRGFIERRKAQAG
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggctgtacctgcagtcgtggaagaaggcgccttgcaacaactgcctcactccttgctc
ccattcctacaagcacagtcgcaggggaccttgacgcgcctatggggacggccaagcgca
tgcctgagcgtatttcggctgttaaggcctttggaccagcagcttgtcatgaaccttctg
tggcttgagtctgccgtgccggcgcaaacaatgcagcaatggatagtacctggtggaaac
aatcgaaagctttaccacgcttctcttgagatactgtccaggcttcatattctgagcgga
aatacacaagtcaggctccaactgaactcgacctggaaagcgagcttgagggcggcaata
acaggcggaactgtcgcaacatcgtctgggagtttcggaattcctgcagaacggggcgcc
aaagattcgatggataaggatggcttggatgctttcgctctggaacgatgggagactatc
ctgcacttcatggtttcatccggcaccgcccataatcctcctcggccctcagcaggcgta
ctctttctgttacaacgcagcggcctgatgggtggcggaggcaatcctcaaatcacatcg
gccggtttccaatttctgttacacgagccacatgcacaattgtgggagcttttgctccag
tatctgaggatggcggaggagcgtcagatggacctcgtcgaggtgctgtctttcatcttc
atgctatcaactacggagttgggacgggagtactcgaccgaaaatttgtctgacacgcag
aaggcaatgctggaggacttgcgggattatggattaatatggcaacaaaagccaacgtcg
aagcggttttcgccgacacgactggcgaccacactcacgtcgtcgtcaccgcccctgccc
acgtcgggcagcggcgtgtcggaaggcttcattgtgctcgagacaaactacaggttatac
gcctacactgataaccccttacaaactgccgttctcgctcttttcaccacccttcgctcc
cgctttcccaacctcgtcgtgggacagatcacccgagagagcgtcaaacgtgcactccaa
agcggcatcagcgcggagcagatcatcagttatttgtcgacgcacgctcaccctcaaatg
cgaaaaaataaccctcttatacccgtgacagtgcaggatcagatacggctatgggagctt
gaaaagaacaggctcaagtcgcaggaaggcttcctctacaccgagttcgcctcgcagggc
gactacgagtacgtccttaactacgcgagggagctaaatgtggtactttgggagaacccc
gtcaagcgttgcttctttgggagcatggaagggcacgccaacatacgagggttcattgag
cggcggaaggcgcaggctggttaa

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