Punctularia strigosozonata: PUNSTDRAFT_131213
Help
Entry
PUNSTDRAFT_131213 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psq
Punctularia strigosozonata
Pathway
psq04120
Ubiquitin mediated proteolysis
psq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PUNSTDRAFT_131213
04120 Ubiquitin mediated proteolysis
PUNSTDRAFT_131213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psq04121
]
PUNSTDRAFT_131213
Enzymes [BR:
psq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PUNSTDRAFT_131213
Ubiquitin system [BR:
psq04121
]
Ubiquitin ligases (E3)
U-box type E3
PUNSTDRAFT_131213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
18878582
NCBI-ProteinID:
XP_007380550
JGI:
131213
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MSQPPTNPQDDADRIRLKRLAKLQSSAASSPSPSPGPESSSASSGIQPKPTPKPVSSTTP
KRVQDPAPSSAVPLKKKPPQTYLKLDVPAWEHDTIGAVLKVTLDKGVAEKSGWETVWLKH
LANELESEGLAPPFHLNTDLIDRLLIARLDIDPQAMSDDMEYLSVLASLPAQQTVFEYLV
GCWKRLNAASDALKKKVGYSASEVQQVLPTLDKLRDLLVSYAGLTLQEPNMFPQPEGKQL
GPHELTASLVSMSALSAPLLSTSTSPEVLGPGEVVHFLQDMANRFDDPSELADVLGPVVR
TMLLTHPSLWRPEGLAGADNAWRGILAGLEALVAIKPIATMITQLPEWNPPHANAHNFEH
LSLMGPLLRLGVFGREWPYVGATYFANPEKRLKSEIDSFFASLRGTLKTLQSTLFQVFNQ
VVRASPQAREAVLQYFARAVSLNVKRTGLQVDPATVATDSFMVNLQDILFRFAEPFMDAN
YTKVDKIDPQYFAHSSRVDLKETTRIKATSEEANRWAEDNRDPSATAPNFISDIFYLCAA
LFNCGYLPTINVFEDMGKHYDDLRRHIETLQGDGSWMGSSLQARVEAAINTVKAQQSKLH
TQMLTLQIQLEDPEFMLRSLTFVNFVSTWIIRFVDPKHRHPTPLVELPLPKDVPLAFRVL
PEYMIEDVIEYMVFVTRHSAGTVELTGKTELTIFCLTFLTSTWYIQNPFLKAKLVEVLFM
GVYGQGPDRKGPLTATLNSHPVALKHLMSALTHFYCEVEQTGASSQFYDKFNSRRNIAYI
LKVVWNNPDHRKALQTEARNVEKFVRFVNLMINDVTYLMDESLADLAKIHNIQTEMENRA
VWESQSMQYRKEKEQELRTLERMASGYCSLGKSTVNLLKIFTAETKAPFMLPEIVDRLAA
MLDYNLDALVGPKCTELKVKDAEKYSFDPRVLLSDILQVYLNLSDQGEFARAVANDGRSY
KKELFERAAAIARKRALKTDPEIEQLRLFVVKVEETKATLEAEDDLGEIPDEYLDPLMFT
LMRDPVTLPSSRVVIDRSTIKSHLLSDTKDPFNRQPLKIEEVIPNVELKAKIDAFLHERK
NKNTALDIPEGDVVNMDITID
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaccgcctaccaatcctcaagatgatgccgaccgaatcaggttgaagcgcctc
gcgaaactccagtcatctgccgcgagttcgccatctccctctcccggtcctgaatcttca
tcagcctcctcgggtatccagcccaagccgactccgaagcccgtatctagtacgactcct
aagcgtgtacaggacccagctccatcatcagccgtgcctttgaagaaaaagccaccgcag
acctacctgaagctggacgtgccagcatgggaacatgacacgatcggtgccgttttgaaa
gtcaccttggataaaggcgtcgcggagaagagcggctgggagacagtgtggctcaagcat
cttgccaacgaattggaatccgaagggcttgctccgccattccatttgaacacagatttg
atagatcgcctgctcatcgccagactggatattgatcctcaggcgatgtcagatgacatg
gaatacttgtcggttcttgcgtctcttcccgcacaacaaaccgtgttcgagtatcttgtt
ggatgttggaagcggttgaatgctgccagtgatgctctgaagaagaaggttgggtactct
gcatccgaagtgcagcaagtgctccccaccctggacaaactgcgagacctccttgtgagc
tacgcgggcttgacattgcaggagccaaacatgttcccgcaaccggaagggaaacagctg
ggtccccacgaactcaccgcgtcactggtatcgatgtcagcgctctcggcccctctgcta
tcgacatcaacgtctcccgaagtgctaggtccgggtgaagtggttcatttcttacaagat
atggcgaatcgcttcgatgatcccagcgaactggcggatgtgttgggacccgtcgtgcgg
acgatgctcctgacacacccttcgctctggcgtccggaaggtctagccggggcggacaac
gcctggcgcgggatcctggccggtttggaggcccttgttgccatcaagccgatcgcgacc
atgatcacacagttgcccgaatggaatcctccccatgcgaatgcccacaatttcgagcat
ctcagcctcatgggtcctctcctgcgcttgggtgtctttggccgagaatggccttacgtt
ggagctacttactttgccaatcctgagaagcgcctgaagagcgagatagattcgttcttc
gccagcttgcgaggaacgttgaagactcttcagtccactcttttccaagtgttcaatcag
gtcgttcgagcttcgccacaggcaagggaggcggttttgcagtactttgctcgtgctgtt
tctttgaatgtgaaacgcacaggtttacaggtcgaccctgctacagtcgcgaccgattcc
ttcatggttaatctgcaagatatactgttccgcttcgctgagccgttcatggatgcgaac
tacacgaaggtggacaagattgatcctcaatatttcgcccactcttccagagtagacctg
aaagagacaactcgcatcaaggcaactagtgaagaagctaatcgatgggcggaagataat
cgagacccttcggccactgcgccgaacttcatatcggacatcttctacctttgtgctgcg
cttttcaactgcggatacctaccaaccatcaatgtgttcgaagacatgggaaaacattac
gatgacctgcggagacacattgagacactgcaaggcgacgggtcatggatgggctcatcc
ctgcaagctcgcgtcgaggctgccatcaacactgtgaaggctcaacaatccaagctacac
acgcaaatgttgaccttgcaaatacaattggaggatccggagtttatgctccgttccttg
accttcgtcaatttcgtttcaacatggatcatacgatttgtcgatccgaagcaccgtcat
ccgacaccccttgttgagctaccgctaccaaaggatgtgccgctggcattcagagtgttg
cccgagtacatgattgaagatgttatcgaatatatggtcttcgtcacacgtcattctgcg
gggactgtcgaactcacggggaaaacagaactgacgatattctgcttgactttccttacg
tcgacatggtatatccaaaatccgttcctgaaagctaagctcgtcgaggtcttgttcatg
ggtgtctatggccaaggaccggatcgcaaagggccactgaccgcaaccctcaactcgcac
ccagtggccctgaaacatcttatgtctgccttgacccacttctattgcgaggtcgagcag
accggcgcgagttcgcaattctatgataaattcaattccagacgcaatatcgcgtacatc
ctgaaggtcgtgtggaataaccctgatcaccggaaagctttacaaaccgaggcacggaac
gttgaaaagttcgtgcgattcgtgaatctgatgattaacgatgtcacgtacttgatggac
gaatcgctcgcggatttggcgaagatccataatatccaaactgagatggagaacagggct
gtctgggagtcccaatcaatgcagtatcggaaggagaaagagcaagagttgcgtacgctc
gagcgcatggcctccggctattgttcgttggggaagagcacggtgaatctgctgaagatt
ttcactgcggagaccaaggcaccgttcatgcttccagaaattgtcgacaggctggcagct
atgctcgactacaaccttgacgcgctcgttggtcccaagtgcactgagttgaaggtcaag
gatgcagagaagtacagcttcgacccgcgagtgttgttatcggatattctgcaggtgtac
ttgaacctatcggaccagggcgagttcgctagggcagtggccaacgacgggaggagttac
aagaaggagctcttcgagagagcggcggcgattgcaagaaaacgagcgctgaaaacggat
ccggaaatcgaacaactgaggttgtttgtcgttaaggtcgaggagactaaggccacacta
gaggccgaagatgacctaggagaaatccctgatgagtacctggacccactcatgttcact
ctgatgcgagatcccgtcacattgccttcttcgcgtgttgtgatcgaccggtctacgatc
aagtcacatttgctctcagacactaaggacccattcaaccgacaaccgttgaagattgag
gaagtgattccaaatgttgaactgaaggccaagatcgacgcgttcctgcacgaacgcaag
aacaagaacaccgctttggatattccagagggcgacgttgtgaacatggacatcaccatt
gactga
DBGET
integrated database retrieval system