Punctularia strigosozonata: PUNSTDRAFT_62710
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Entry
PUNSTDRAFT_62710 CDS
T03131
Name
(RefSeq) Ssl1-domain-containing protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
psq
Punctularia strigosozonata
Pathway
psq03022
Basal transcription factors
psq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PUNSTDRAFT_62710
09124 Replication and repair
03420 Nucleotide excision repair
PUNSTDRAFT_62710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psq03021
]
PUNSTDRAFT_62710
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_62710
Transcription machinery [BR:
psq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PUNSTDRAFT_62710
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PUNSTDRAFT_62710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
DZR_2
Motif
Other DBs
NCBI-GeneID:
18884606
NCBI-ProteinID:
XP_007381579
JGI:
62710
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MPPRRAGDFVMDVDSDSDVDILDEPNGRSQGKGKGKATDKSGRRKGKSKASEQPYAWEAS
YTRSWDMVQEDETGSLTAAVQDLVARGRRRRLLGPGGAIRRTIIRHLILVLDLSSSMTDR
DMRPTRFGLTLEYAREFITEWFDQNPLGQIGIVGMRAGVGERIGQMSGNPQDVLKAISER
HKMEPNGEPSLQNAIEMARSSMSHLPTHSSKEILIVFGSLTTVDPGNIHDTLDACIKDRI
RISIVALAAEMKICREICDKTGGQFGVAMNEGHYKDLLFELIPPPAQRALTSKAGSGGAT
ADLMIMGFPTRLPDTSPPSLCVCHSELKSEGFLCPRCLAKVCDVPTDCDICGLMIVSSPH
LARSYHHLFPVKPYTAV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgcagagcgggcgacttcgtcatggacgtggattcagactcggatgtagac
atcctggacgaacccaacggacggtcgcaggggaaggggaagggaaaggcgaccgacaag
agtggtcggagaaaaggaaagagcaaagcgagcgagcaaccatatgcatgggaggcgtcc
tatacgcgctcttgggacatggtacaggaggatgaaacaggaagcttgacggcagccgta
caagatcttgttgcacgagggcgcagacgcagactacttggtcctggcggagccatccgc
aggacaatcatccggcacctcatcctcgtacttgacctttcatcgtccatgacggaccga
gacatgcgacctacaagattcgggttgacgttggaatatgcacgcgaattcattacggaa
tggtttgaccagaatccgctgggacagatcggcattgtgggtatgcgagccggagtcgga
gaacgtatcggacagatgtccggaaacccccaggatgtgctgaaggcaatctctgaacga
cataaaatggagccaaacggggagccgagcctacaaaatgcgatcgagatggcacggagc
agcatgagccatctcccaacgcattcgtccaaggagatcctcatcgtctttggatcgttg
acgactgttgatcctggcaacatacacgatacgcttgatgcctgcatcaaggatcgaatt
cgaatatccatcgtcgctcttgcggcagagatgaaaatatgtcgcgaaatatgcgacaag
actggcggtcagtttggtgtggcgatgaacgaaggccactacaaagaccttctattcgaa
ttgatcccgccgccagctcaacgagccctgacatccaaggcgggcagtggtggcgcaacg
gccgacctcatgataatgggttttccgactcgattgccagatacatcgccgccgagccta
tgcgtgtgtcactcggagctcaagagcgagggtttcctctgtcctcgatgcctcgcgaaa
gtgtgcgacgtgcccaccgattgcgatatttgcggcttgatgatcgtcagttcgccgcat
cttgcacgcagctatcaccatcttttccctgtcaagccgtacacagcggtgtaa
DBGET
integrated database retrieval system
