Punctularia strigosozonata: PUNSTDRAFT_85868
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Entry
PUNSTDRAFT_85868 CDS
T03131
Name
(RefSeq) WD40 repeat-like protein
KO
K14855
ribosome assembly protein 4
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_85868
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PUNSTDRAFT_85868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
NLE
Nup160
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
18886205
NCBI-ProteinID:
XP_007382756
JGI:
85868
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MATLLPPPKRQKVYHGVPEPEPEPVQPAPNVVVQFVSEDDGKPLAPAVNLPANIPRDALE
SLVNKLSTTDDDPVPFSFSIAVPGDTSNNGAPTRIVISNSIEKDVLSHPTHDFSPEDIFV
IQCSPQAVFKVRPATRCSSTLSGHSSPILCASFSPTGNLLATGSGDCNARLWDLFTETPS
HVLSGHKGWVLCVEWDGMERKLATGGHDGHVRLWDPKSGKPIGDAMRGHTKWVTSIAWEP
IHINAAAPRLASSSKDGSVRVWLASTTRQLEYTLGGHSASVNVVRWGGGGVGGKGVLYTA
SSDRTVRVWDANGGKPIYTLKDHAHWVTTLALNTDFVLRTGPYDHTGKKPKSDQEAQSLS
KARYDALATSVPELLISGSDDQTLYLWSLFPASGDAGKPKPVARLTGHQKQLSHVAFSPD
GRFAASAAFDNSVRIWEGRTGKFVATLRGHVGAVYRLAWSADSRLLVSASKDSTLKIWDL
KTYKLKTDLPGHTDEVYCVDFVADKVVSGGRDRKVKIWKN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctccttcccccacccaagcggcagaaggtgtaccacggcgtaccagaacca
gaaccagaacccgttcagcctgcaccaaatgtcgttgtgcaattcgtctccgaagatgat
ggcaagcctttagctcctgccgtgaatttgcctgccaacattccacgggatgccttggaa
tctctggtgaacaaactaagtacaacggacgatgatccggtgccgttctcgttttctata
gctgtacccggggacacatccaacaatggcgcccctacccggatcgtcatctccaactct
attgaaaaagatgtactatcacatcctacccatgacttctcgcctgaagatatattcgtg
atacaatgctccccacaagccgtattcaaggtgcggcccgcaacgcggtgctcttcgact
ctgagcggacactcctcgcctatactctgcgcatctttctcgccaactggtaatttgctt
gcgaccggatccggcgactgtaatgcacgactgtgggacttgttcacggaaacacctagc
catgtactgtcagggcacaagggctgggtgctatgcgttgaatgggacggcatggagagg
aagcttgcgaccggcggacatgatggccatgtacgactatgggatcccaagagcggcaag
ccgataggtgacgccatgaggggccacacgaaatgggtcacatccattgcatgggaaccg
atacatatcaatgccgcagcacctcgcctggcttcctcctctaaggatggctcggtccgc
gtatggttagcatcgacaacgcgacagcttgaatacacgcttggagggcattcagccagt
gtaaacgttgtgcgatggggtggaggcggcgtaggaggtaaaggtgttctttataccgcc
tctagcgatcgcactgtccgcgtgtgggatgccaatggtggaaagccgatctataccctg
aaagatcatgcgcactgggtgaccacattggccctcaacaccgatttcgttcttcgaact
ggaccttacgaccacacgggcaagaaaccgaagtcagatcaagaagcgcaatccctctcc
aaagcacgatatgacgcgctcgccacctccgtacccgaacttctcatctccggctcggac
gatcagacgctctatttgtggtccttgttccccgcctcgggcgatgcggggaaaccaaag
cctgttgcgcgtctgaccggacatcaaaaacagctgtcgcacgtcgccttttccccagac
ggacgcttcgcggcctccgctgcgtttgataatagcgtgcggatttgggagggacggacg
ggcaagtttgtagccacgttgcgaggtcatgtcggtgcagtttaccgcctagcctggagc
gccgactcgagactgctcgttagcgcgagcaaggacagcacactcaagatctgggatttg
aagacatacaagttaaaaacggaccttcccggtcacacggacgaagtgtactgcgtggac
ttcgtagctgataaggtcgtgagcggtggccgcgaccggaaagtgaagatatggaagaac
tag
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