Pelodiscus sinensis (Chinese soft-shelled turtle): 102447403
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Entry
102447403 CDS
T02980
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102447403 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102447403 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102447403 (THOC1)
03041 Spliceosome [BR:
pss03041
]
102447403 (THOC1)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102447403 (THOC1)
Spliceosome [BR:
pss03041
]
Complex C
Other components
EJC/TREX
102447403 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102447403 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
102447403
NCBI-ProteinID:
XP_025035229
Ensembl:
ENSPSIG00000007691
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MDTLPTPLLPEYPPDCRQNWNSTRDALTNKTIKPLLNAFNQIPGSENEKKCTLDQSFRVV
LEEEIINQASCENVLAIISLAINGVTDGICTASTPFVLLGDVLDCLPLDHCDKIFTFVEK
NVTTWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQ
SQFNLENVTVFNTNEQDSTLGQKVRINVGQKHIEERDEGMEVEEGEMGDDEAPTSCSIPI
DYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELK
TGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQS
LWIEDTTKLVYQLLSENPPDGERFSKMVEHILNTEENWNTWKNEGCPSFVKERPSDSKPT
RLVRKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEA
IEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLA
KELPPPSEEIKTGEDEDEEDNDALLKENNESPDVQRDKPVTGEQIELFAIKLGEQWKILA
PYLEMKDSDIRQIESDSEDVKMRAKQLLVAWQDQEGIHATPENLITAMNKAGLSDLAESL
MNDTENSS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgccaaccccgctgttgcccgagtatccaccggactgtcgccagaattgg
aattctactcgagatgctctgaccaacaaaactattaagcccttattgaatgcattcaac
cagattcctggaagtgaaaatgaaaagaaatgtaccctggatcaatctttcagagttgtt
ctagaagaggaaattataaaccaagcttcatgtgaaaatgtcttggctattatttctctt
gctattaatggagttacagatggaatctgcacagcatcaaccccttttgtgcttctggga
gatgttctggattgccttcctttggatcactgtgataaaatttttacctttgtcgaaaaa
aatgtcactacgtggaagtctaatacgttttattcagctgggaagaattacttgctgaga
atgtgcaatgacctcctaagaagattatctaaatcacaaaatacagtcttttgtggaaga
attcaactattccttgctagattatttcctctttcagagaagtcaggacttaacttgcaa
agtcagtttaatctggaaaatgtcacagttttcaatactaatgaacaagacagcactttg
ggacagaaggtgagaattaatgtgggacagaagcacatagaggagagagatgaaggaatg
gaagtagaagaaggtgaaatgggagatgatgaagctcctacaagttgctccattccaata
gattacaacttgtatagaaaattttggtcgcttcaagattactttaggaatcctgtacag
tgctatgagaaggtttcatggaagacatttctgaagtactcagaagaagttttggctgtt
tttaaaagctacaaattggatgacactcaagcttccagaaaaaaattggaagagctaaaa
acagggggagaacatgtctactttgcaaagttcttaactagtgaaaagctaatggattta
cagctgagtgacagtaacttccgccgtcacatcttgctgcaatatctaatactatttcag
tatctaaagggtcaggtaaaatttaaaagttcaaactatgttctaactgatgaacagtcc
ctctggattgaagatactactaaattggtttatcagcttctttcagaaaaccccccagat
ggggaaagattctcaaaaatggtagagcatatattaaacactgaagaaaactggaacacc
tggaaaaatgaaggttgcccaagttttgtgaaagaaagaccatcagattccaagccaaca
agacttgtgagaaagaggccagctccagaggatttcctagggaaaggaccaaacaaaaaa
attctcatggggaatgaggagctaactcgactttggaacttatgtccggacaacatggaa
gcttgtaaatctgagactagggaatatatgccaactctggaggagttctttgaagaggcc
attgaacaagcagatcctgaaaatatggttgaaaatgagtacaaggctgtgaacaattct
aattatggatggagagcattaagattactagcacgcagaagtcctcacttcttccagcca
accaatcaacaatttaagagtttaccagaatacttagaaaacatggtaatcaaattagcc
aaggagttgcctcctccttctgaagaaataaaaacaggagaggatgaagatgaggaagat
aatgatgctttattaaaggaaaacaatgaaagtcctgatgtacagcgagacaaacccgtg
acaggggaacaaattgagttatttgctatcaagcttggagaacagtggaagattctggca
ccctacttggaaatgaaggactctgatataagacagattgagtcagatagtgaggatgtg
aagatgagagctaagcagctacttgttgcctggcaggatcaagagggaatacatgcaaca
cctgagaatctgattactgcgatgaacaaagctggattaagtgaccttgcagaaagccta
atgaatgatacagaaaacagtagttaa
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integrated database retrieval system
