Pelodiscus sinensis (Chinese soft-shelled turtle): 102461130
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Entry
102461130 CDS
T02980
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102461130
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102461130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
PRY
Abi_alpha
CENP-F_leu_zip
zf-ANAPC11
TRAF3_RING
Trm112p
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
102461130
NCBI-ProteinID:
XP_025033945
Ensembl:
ENSPSIG00000005375
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSNTNFFLLEDNIVCPICLEVFTNPVTTACGHNFCMDCLQDYWDHQAVIGECPYCPQCRE
PFSSRPRLRKNISLGEIAEKFAREEAQATAKLPPVGPNDIPCDLCSSRKVKSIKSCLQCM
ASLCENHIQLHYEDKTFKNHQLLEPMSDLKARLCQKHHKLQELYCRTEGGLVCHTCVREE
HKNHDAIPIQEEKARKVVEAKRVQANVENRILMMASDSHKHKGRVIYLAKVVKNSREEVN
QSFVEIIKEIKRMQVKVLEFLDKEERAALVQLGNSIQQKQGNLSELNKQNLWLTNLLDNT
SDQQFLQEFPKLKKLGACTEPVVSLKCEESSSFVSLKQTLGDLKAQLVMVGLCFINKILT
KGITMLPYEVIPADVERKSLLKYYCNLNFDSNTANEELLLFKETHSVLNMGILLESFFGS
CQGFNHWPQVLCTRSLCEGCHYWEIEISNSWVCLGATYSYLHKTGKSCIFYLIGRNDTSW
CLEWDSLKFSVWHNNIQAVVKGSYYKTIGIFLDYAAGSLTFYGVSSTMNLIYRFVTTFTE
PLYPAIMVGSGGSVTLKQHPE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaaatttttttctccttgaggacaacatcgtgtgcccgatatgcctggag
gtgttcacaaaccctgtcaccaccgcctgcgggcacaacttctgcatggattgcttgcag
gattactgggaccaccaagctgtgatcggggagtgtccttactgtccacagtgccgagaa
cccttcagctcacggcctcgactccgcaaaaatataagccttggagaaatagcagaaaag
tttgcccgggaagaggctcaggccacagccaagctcccgccggtgggtcccaatgacatc
ccttgcgatctctgctcctcaaggaaagtgaagtccatcaagtcctgcctgcagtgcatg
gcctccttgtgtgaaaaccatatccagttacactacgaagacaaaacttttaaaaaccac
cagctgctggaacccatgagtgacctgaaagccagactgtgccagaagcatcacaagctg
caggagctgtactgtaggacagagggtgggttagtttgccacacgtgcgtgcgggaggag
cacaagaaccatgatgcgatcccaatacaggaggagaaagccaggaaagtggtggaggcc
aagagagtacaggccaatgtagaaaaccgaatcctgatgatggcatcagacagtcacaaa
cacaaagggagggtgatctatcttgcgaaagtggtcaagaactcaagagaggaggtgaac
caaagctttgtggagattataaaggagatcaaacgaatgcaggtgaaggtgctggagttt
ttggacaaggaggagagagctgccctggtccagctgggcaattccattcagcaaaagcaa
gggaacctctctgagctcaacaagcagaacctctggcttacaaacctccttgacaataca
agtgaccaacagttcctacaggaattcccaaagctcaagaagttgggagcctgtacggaa
cccgtagtcagtctgaagtgtgaggagagctcaagttttgtcagcctgaaacagactctg
ggggacctgaaggctcagcttgtgatggttggcctctgcttcatcaataaaatcctcaca
aaaggaataacaatgctaccctatgaggtgataccagcagatgtggaaaggaagagcctc
ctgaaatactactgcaatctgaactttgacagcaacaccgccaatgaggagctcttgctg
ttcaaggagacccactctgtgctgaacatgggcatcctgctggagtctttcttcgggtcc
tgccagggattcaaccactggccacaggtcttgtgtacccgcagcttgtgcgagggctgc
cattactgggagatagagatctcaaactcatgggtctgcttgggagccacctatagttac
ttgcacaagactgggaagagctgcatcttttacctgataggtcggaatgacacctcatgg
tgcttggagtgggactccttgaagttctctgtctggcacaacaacatccaagccgtggtg
aagggcagctattacaagaccatcggcatcttcttggactatgctgctggttccctgact
ttctatggtgtctccagcaccatgaacctcatctaccgctttgtgactacgttcacagag
ccactgtatcctgccatcatggttggcagtggtggctccgtgaccttgaagcagcatcca
gagtaa
DBGET
integrated database retrieval system
