Pelodiscus sinensis (Chinese soft-shelled turtle): 102461645
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Entry
102461645 CDS
T02980
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pss04515
]
102461645
Cell adhesion molecules [BR:
pss04515
]
Immunoglobulin superfamily
DSCAM family
102461645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Sp38
V-set_CD47
C1-set
Interfer-bind
fn3_2
Ig_C17orf99
ChitinaseA_N
DUF6377
Adeno_E3_CR1
DUF4446
Motif
Other DBs
NCBI-GeneID:
102461645
NCBI-ProteinID:
XP_006123435
Ensembl:
ENSPSIG00000007733
LinkDB
All DBs
Position
Unknown
AA seq
1852 aa
AA seq
DB search
MRHSEHSKLICLSGSRFLITSTGALYIVDVQNEDGLYNYRCITRHRYTGETRQSNSARLF
VSDPANSAPSILDGFDQRRAMAGQRVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVT
GLLIENTRPSDSGNYVCEVWNNYGTAEVIGHLHVKQPLKATISPRKVKSSVGSQVSLSCS
VTGTEDLELSWYRNGEIINPGNNVRITGINHENLIMDGMAKSDGGAYQCFVRKDKMSAQD
YVQVVLEDGTPKIISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIIKDGNHRIS
QIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVILYQARINVRGPASIRPMKNITAI
AGRDTYIHCRVIGYPYYSIKWYKNSDLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCN
VLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFVPCVVVSGDLPITITWQKDGRP
IPASLGVTIDNIDFTSSLRIFNLSLMHNGNYTCIARNDAAAVERQSQLIVRVPPRFVVQP
SDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHV
LEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKP
IIVRWEKEDRIINPEMSRYHVSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRG
IIQLTVQEPPDPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTK
DVSPQLNQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPQEVQLEPV
SSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLDNLKK
FTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKEA
LNGILQGFRVIYWANLLDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVR
SEQIFTRTKEDVPGPPAGVKAAAASPSTVFVSWLPPFKLNGVIRKYTVFCSHPYPTVISE
FEASPDSFSYRIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVT
TPWMKDIVLPCKAVGDPSPTVKWMKDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGY
YSCVASNNWGSDEIILNLQVQEPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQY
SEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQ
FSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFRTTVWTTAQRTSLSKSYILY
DLQEATWYELQMRVCNSAGCAEKQAKFATLNYDGSTIPPLIKSVVQSEDGLATNEGLKML
VTISCILVGVLLLFVLLLIVRRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTL
RMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATG
PLVDVSDARPGTNPTTRRNAKTGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAA
GSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITE
CFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTASPPKPQDGGRVTNMAVPKAHRPG
DLMHLPPYLRMDFLLNRGVSGTSRDLSLGQACLEPQKSRTLKRPTVLEPIPMETSSTREV
QSWQPGAMATLPQREGAELGQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgaggcattctgaacacagtaaactcatatgtctttcaggatctagatttctcatcaca
tccacgggagccttgtatattgtagatgtacagaatgaagatggattgtataactaccga
tgtatcacacggcacagatacactggagaaacaagacaaagtaacagtgcaagacttttt
gtatcagatccagcaaactcagcaccgtctattctggatgggtttgaccaacgtagagcc
atggcaggacagcgagtggagctgccttgcaaagcatcgggacacccggcaccaaagtac
cgttggctgaaagacaatgttccttgggaaccagatagcaggtttcggcagacagttact
ggtctgctgatagagaacacccgtccttcagactcaggcaactacgtgtgtgaggtgtgg
aacaactatggtactgctgaggtgataggacatctacatgtaaaacagcctctgaaggcc
acaatcagtccacggaaagttaaaagcagtgttggtagtcaagtgtccttgtcctgcagt
gtgactggaactgaggacctagaactctcctggtaccgaaatggtgaaataatcaaccct
ggaaacaatgtgaggatcacagggatcaaccatgagaatcttattatggatggcatggcc
aaaagtgatggtggagcataccagtgctttgtacgcaaggacaaaatgtctgctcaagac
tatgttcaggtggtgctagaagatggaactcccaaaatcatttctgccttcagtgagaaa
gtggtaagtccaggagagcctgtctcccttatgtgcaatgtgaaggggacacctttgcct
acaatcacctggacactggatgaagatcccataatcaaagatggtaatcaccgtatcagc
cagattatcacctctgagggcaatgtggtcagctacctgaatatctctaacactcaggtc
cgagatgggggagtctatcgctgtactgccaacaactcggctggagtcatcctgtaccag
gctcgaataaacgtaagaggcccagcaagcatccgtccaatgaaaaatatcacagcaata
gcaggacgggacacctatatacattgccgtgtgattggctatccatattactccattaaa
tggtacaagaactctgatctgcttccttttaaccatcgccaagtagcatttgaaaacaat
ggaacactgaaactctctgatgtgcaaaaggaagtggatgagggggaatatacatgcaat
gttctggttcaaccccagctgtctacaagccagagtgtccatgtaactgtaaaagttcca
cctttcatccagccttttgagtttccaagattctccattgggcagcgagtcttcgttcca
tgtgttgtggtctcaggggatttgccaatcacaatcacctggcagaaggatggcaggcca
atcccagccagtcttggagtaaccattgacaacattgacttcaccagctccttaaggatt
tttaatctttcactgatgcacaatgggaattatacctgtatagctagaaatgatgctgca
gctgtggagcgccaaagccaattaattgtgagagttccccctagattcgtggttcaacca
agtgatcaggatggaatttatggtaaagctgtaatcctcaattgttctgcagagggttat
cctgtacccaccattgtctggaagtactcaaaaggtgctggggtcccccaattccaaccc
attgccttgaatggccgtatccagcttctcacaaatggctccttgttgattaaacatgtg
ctggaggaagacagtggatactacctctgcaaggtcagcaatgatgttggagcagatgtc
agcaagtccatgtacctcactgttaaaattcctgcgatgatcacttcctatccaaacacc
actttagcaacacagggtcaaaaaaaggagatgagctgcacagcacatggagagaaaccc
atcatagtccgctgggagaaagaggatcgaatcattaaccccgaaatgtcccgctatcat
gtttccaccaaggaagtgggcgatgaagtcatctctaccttgcagattttgccaactgtg
cgtgaagattctggcttcttttcctgccatgctatcaattcttacggggaggaccgtgga
ataattcagctcactgtgcaagagccaccagaccctcctgaaatagaaatccgagaggtg
agagcacgcagcattgccctccgatggacaatgggatttgatggaaatagtccaatcaca
ggctacgatattgaatgcaagaacaaatctgactcctgggattccgttcagcgaaccaaa
gatgtctcccctcagctgaaccaggccactatcattgacctccacccttcctccacctac
aacatccgcatgtacgccaaaaaccgcattggcaagagtgaagcaagcaatgagctcact
atcactacagatgaagcagctcctgatggcccacctcaggaagtccaacttgagcctgta
tcttcacaaagcattcgggtcacctggaaagctccaaagaagcacttacaaaatggaatt
attcgtggataccagataggctaccgggaatacagcgcagggggcaatttccagttcaat
atcatcagtattgacaccaccggagacagtgaagtttataccctggataacctgaaaaag
ttcacccagtatggcatggtagtacaagcatgtaacagagctggaataggaccttcttct
caggaaatcatcaccactaccctagaagatgtacccagttgccctccagggaacgttcaa
gccaccgctacatcaccagaaactatctcaatttcctggtctacacttgccaaagaagcc
ctgaatgggattctacagggattcagggttatttactgggctaatctcttggatggagag
ctgggagagattaaaaatgtcactactacacagccctcactagagcttgatggcctggaa
aaatacaccaattacagcatccaggttttggcattcacacgagctggagatggagtcagg
agcgaacaaattttcacccgcactaaagaggatgttccaggtcctcctgctggagttaaa
gcagctgcagcttcaccatccactgtgtttgtgtcctggctccccccctttaagttaaat
ggtgtaatccgaaagtacaccgtgttctgctcacacccctatcccacagtaatcagcgag
tttgaagcctctcctgactcattttcctacagaatccccaacttgagtcggaatagacag
tacagtgtctgggtggtggctgtgactgctgccggaagaggcaacagcagcgaaattatc
actgtggaaccattggcaaaagctccagccagaattctgacattcagtggcacagtaaca
accccatggatgaaggatatcgtccttccttgcaaggccgttggggacccatctcctaca
gtcaaatggatgaaggatagtaacgggacacccagtctagtgacgattgatgggcgaaga
agcatctttagcaatggcagctttgttatccgtactgtgaaagcagaggattctggatat
tacagctgtgtggctagtaacaactggggatcagatgaaattattttgaatttgcaggta
caagagccaccagaccagccaagacttactgtgtccaaaaccacatcttcttctatcact
ctttcttggatacctggagacaatggtggtagttctatccgaggttacatacttcagtac
tctgaagataatagtgagcagtggggtagttttcctattagccctagtgaacgatcctat
cgtttagagaccttgaaatgtggcacctggtataagttcacactgactgctcagaatgga
gtgggaccaggacgcatcagtgagatcatagaggccaaaacacttggaaaagagccacaa
ttttccaaagaacaagaactctttgccagtattaacaccactcgagtgagattgaacctt
attggctggaatgatggtggttgtccaatcacctcctttactctggagtataggccattt
cggaccacagtttggacaacggctcagaggacatcactttctaagtcctacatactatat
gacctccaggaagcaacttggtatgaacttcaaatgagagtgtgcaacagtgcaggctgt
gcagagaaacaggccaaatttgccacactcaactatgatggcagtacaatccctccactc
attaaatcagttgtccaaagtgaagatggtctggcgaccaacgaagggctaaagatgttg
gtgaccatttcctgtatcttggtgggggtcttgctgctttttgtgcttctgctgattgtg
cgaaggaggaggagggagcagagactgaagcgactcagagatgcaaagagtttggctgaa
atgcttatgagtaagaacaccaggacctcagatactcttaacaagcagcagcagacgcta
aggatgcacatagatattcccagagctcagcttctgattgaagagagagacacaatggag
actattgatgacagatcaacagtgttgttaactgatgctgattttggagagacatccaaa
cagaaatcattgacagttactcatacagtacattaccagtctgtttcacaagctactgga
ccattggttgatgtttctgatgcccggccaggaacaaatcctacgacaagaagaaatgcc
aaaactgggcccacagctcgcaatagatatgctagtcaatggactctcaacagaccccat
cctactatatcagcccacactctcactacagattggaggctgccaacacccagagctgca
ggatcagtagacaaggaaagtgacagctacagtgtgagcccctcacaggatacagatcga
gcaagaagcagcatggtctccacagaaagtgcctcctctacgtatgaagagctagcaaga
gcatatgaacatgctaagatggaagagcagctgagacatgccaagttcacaattacggaa
tgctttatatcagacacgtcatcggaacagctaacggcagggactaacgagtacacagac
agtctgacctcaagcacaccatcagaatcgggaatctgcagatttactgcttcacccccg
aaacctcaggacggaggacgcgtgacaaacatggcagttccgaaggcacatcggccaggt
gacctcatgcatttgccaccgtatcttagaatggactttttgttaaaccgaggtgtttca
ggcactagcagagacctgagtttgggacaagcctgcttggaacctcagaaaagccgaacc
ttgaagcgtcccacagttctggagccgatacctatggagacatcctccacgagagaagta
cagtcatggcaacctggtgccatggcaacattacctcagcgagaaggagctgagttagga
caggcagctaaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaa
ggaaacaatccctacgcaaaatcttacaccctggtataa
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integrated database retrieval system
