Pelodiscus sinensis (Chinese soft-shelled turtle): 102464050
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Entry
102464050 CDS
T02980
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102464050 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102464050 (DDX46)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102464050 (DDX46)
Spliceosome [BR:
pss03041
]
Complex A
U2 snRNP components
U2 related factors
102464050 (DDX46)
Complex B
102464050 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
102464050
NCBI-ProteinID:
XP_006116110
Ensembl:
ENSPSIG00000004522
UniProt:
K7F9X8
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSRSRSPSDKRAKRGEDRRSRSRDRERRRERSRSREKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRERRRSRSRSRRSRSSSPAKNKKTENSSKSKEK
TEGVEVSKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEEEEIEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEVDL
QTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTLEEVNVYRLEMEGIIVK
GKGCPKPIKTWVQCGISMKILSSLKKHGYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKT
IAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGFRVVCVYGGT
GISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQV
MRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQEVIVIEEE
SKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIN
DFKNGVCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAFTFI
TEDQARYAGDIIKALELSGKPIPAELEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDET
EQALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDMAAPGTSNVPTPTA
GNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKT
IAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDFPQTARWKVTSKEAL
QRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIR
LQNSYQPTNKGRYKVL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagagtccaggcattatcggaagcgctccacatcacgtggacgatctggtagc
cgttctagaagtcgatctccatctgacaaaagagcaaaacgtggagaagacagacgatct
agaagtagagatcgagaacgcaggcgtgagaggtcacgcagcagggagaagaggagatct
cggtcacgggacagaaagcgcttgagacgttcaagaagcagagagagggaacggagcaga
gagaggaggaggtcacgcagtcgagagagaaggaggtccagaagcagaagtagacggtca
cgctcctccagtcctgccaagaataagaaaacagaaaacagctcaaagtctaaagaaaag
acagaaggtgtggaagtttccaaagaaaagaaaaaagagaaagaagacaaagaagaagaa
aaggacaaagatgttagtaactttgatcagaacaaactagaggaggaaatgagaaaacga
aaagagagagtggagaaatggagggaagaacagcgcaagaaggctatggaaaacatagga
gaactgaaaaaagaaattgaagagatgaaacaaggaaaaaaatggagcttagaagatgat
gatgatgacgaagaggagactgcagaaggggaaaaggaagaggaggagattgaagatgaa
gaattagatccactggatgcttatatggaagaagttaaagaagaggtcaagaagtttaat
atgagaagtgtgaaaggtggaggtgggagtgaaaagaaatctggaccaactgttaccaaa
gtagtaactgtggtgacaaccaaaaaagcagctgtggaatcagaaaagaagaaaggggag
cttatggagaatgaccaagatgcaatggagtactcatcagaagaggaggaagttgatctt
cagactgccctgacaggttatcagaccaaacagaggaagctgttggaaccagtggatcat
ggaaagatagaatatgagccctttaggaaaaacttctatgttgaagttccagagctggct
aaaatgaccttagaggaggtgaatgtatacaggctggaaatggagggaataatagtaaag
gggaaaggctgccccaaaccaatcaaaacctgggtacagtgtggtatttccatgaagatt
ctcagttccctcaagaaacatggctatgaaaaacccactccaatccaagctcaggctatc
ccagcaattatgagtgggcgtgacttgattggtattgctaaaacaggaagtggaaagact
attgcattcctgttgcctatgttcagacacatcatggatcagagatcgttagaagaagga
gaaggtccaatagctgtcatcatgaccccaacccgagagttggctttacaaattaccaag
gaatgtaagaagttctcaaagacacttgggtttagagttgtctgtgtctatggaggaaca
ggaataagtgaacagattgctgaactaaaaagaggtgctgaaattattgtttgcacacct
ggacgtatgattgacatgttagccgctaacaatggtcgggtgacaaaccttcggagagtt
acatatgttgtactggatgaagcagacagaatgtttgacatgggttttgaaccacaggtc
atgcgcattgtagacaacatcagacctgatcgtcagacagtcatgttctctgccaccttc
cccagagctatggaggcattagctcgtcgaattctgaataagccgattgaggtgcaagtt
ggaggcaggagtgttgtttgttctgatgtggaacaggaggtgattgtgatagaagaagag
agcaagttcctaaagttacttgaactgcttgggcattatcaggagaaaggatctgtcatc
atatttgttgataaacaggaacatgctgatggattgttgaaagatttaatgagagcctct
tatccctgcatgtcacttcatggaggtattgatcaatatgacagagacagcataattaat
gattttaagaatggagtatgcaaacttcttgtggccacatctgtagcagcacgaggcctg
gatgtaaagcaactaatgttggtagtcaattacagctgtcccaaccattatgaagattat
gtgcacagagcaggccgaactggacgagctggcaacaaagggtatgccttcaccttcatt
actgaagatcaagcacggtatgctggtgatataattaaggctttggaattgtcaggaaaa
ccaattcccgctgagctggagaagctctggagtgacttcaaagatcaacagaaggctgag
gggaaaattattaaaaagagcagtggattctctggcaaaggattcaagtttgatgaaaca
gaacaggccttggctaatgagcgaaagaaactacaaaaagctgctcttggccttcaggat
tcagatgatgaagatactgctcttgatattgatgaacaaattgagagcatgttcaattca
aaaaagagagtaaaagacatggcagcaccaggaacatctaatgtgcctacaccaacagct
ggtaatgcagaaaaactggaaattgccaaaagactagctttaagaattaatgctcagaag
aatcttggagcagaggcacaagtattggtcccttttcactttaaggatgtgatgcagcag
gctacaaatgcaatcttgagaggaggcacaattcaggctcctactgtatctgccaaaact
attgcagagcaactggctgaaaagataaatgccaagctcaattatgtacccatagaaaaa
caagaggaagaaaaacaggagggaggacagaatgaatcgtttaagagatatgaggaggaa
ttagagatcaatgatttcccacagactgctagatggaaggttacctccaaggaagctctg
cagagaatcagtgaatattcagaagctgccattactatcagaggaacatatttccctcca
ggcaaagagcctaaggaaggagaacgaaaaatttacttggctatagagagtgccaatgaa
ctcgctgtgcagaaagcaaaagcggaaatcactagacttataaaagaagaacttatcaga
ttgcaaaattcataccagccaaccaacaaaggaagatacaaagttctgtaa
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integrated database retrieval system