Pseudomonas syringae pv. tomato DC3000: PSPTO_0892
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Entry
PSPTO_0892 CDS
T00118
Name
(GenBank) autotransporter, putative
Organism
pst
Pseudomonas syringae pv. tomato DC3000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AAO54426
UniProt:
Q888X2
LinkDB
All DBs
Position
complement(969369..972419)
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AA seq
1016 aa
AA seq
DB search
MNPLFRISPLAFAITLALLPEAHAVDYVLTNGQDTFSSDRVIDGAIDVNSTDGNTSTLTI
NSGATVTSEGGRIVGQASRTGVNMAQANVVVEGAGSRWVVPRTSFVLGNTIVVGGVGQGD
LTVRNGGQVSVRDLDLGDVSGARSNAFSNATLSVSGQNSLVDAVNIEAGGVFVYRSSITA
NEGARINSQQVDIDSVVRLSGAGTRWDNSGSFRNRNDLTLENGAVLTSNELRLGSAVVNR
SNQVNVTGQGTRLDAQTLTLGTSIVRTYLTLADGAELSATNGMLISLVNDSNTATRGTLA
IGGSVAVDPDRTDVDSMTAGAAQAAGRLNPQTAVSFGTGNGSLAFNHTDPDLQFANTLNG
TGRVYAFSGNTTLSGDTSGLAGSVVVRGGRLVLSGNVDQVNQRGNTATTQSVSRFNVGNG
TLVVNGIAGRTEFGTYTNSAQVLDGGILAGVGQVGTTQVSAGGTLSPGENAIGALAIQGD
LDMAAGSRYAADIAGDGRADKINVSGTATLRGTQVNVTALDPAQSYQSGRTYTLLSAQGG
LVDGAAAGTAYAQALTNSAFLNVGLQRTANDLNLTIEQKSVEPTPTPTPTPTPTPTPTPT
PEPTPTPTPTPTPTPEPVPTPTPTPTPEPAPTPAPEPAPAPGIFQTVMLTQNQFNTAGAL
SVLAQSGEPLRLYNNLLVLDAEGARDAADQLSGDYHSSTSTALIANSQVVSGVLGTRLRN
LLDTGTLRMPAMALNLMPSAPTTQNGAWVQPFGNWTKVDGNNGAGGLQQSTGGLLFGADG
SFTPDWRGGVYAGYSRSKFDADNRDADGHSDNYHLGLYTGAQIDALRLSADVGYTWHKLE
SERNVAFAGFSDHLTGKRNAQSLQASGEAAYRIPIGRVALEPFAGLSYVRYDAKDMHEKG
GPAALDVSSDKQDTFFSTLGLRASSNIDVANINTQVYGSLGWRRAYGDLDPRNIQSFAGG
PNFEVQGVAQARNTALTEVGAKLRLNQRTDLDLSYQGQFGTDTRFHSVNAGVTVRF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccttatttagaatatccccccttgcctttgcgattactcttgcactgctcccg
gaggcccatgcagttgactatgtgctcactaacggtcaggacacctttagcagcgaccgc
gtgatcgatggcgcgatcgacgtcaattcaactgacggcaacacctccaccctcacgatc
aacagcggcgcgacggtgaccagcgaaggcggccgtatcgtgggtcaagccagccgcacc
ggcgtcaacatggctcaggccaacgttgtagttgaaggggccggttcgcgctgggtggtg
cctcgtacctcattcgtgctcggtaacaccatcgttgtcggtggtgtaggccagggcgac
ctgacggttcgcaacgggggccaggtgtcggtacgggatctggatctgggtgacgtcagt
ggcgcccgttctaatgcattttcgaacgcgacgctgtcggtgagcggccagaactccctg
gtcgacgcagtcaacatcgaggccggtggagtgtttgtctatcgctcgagcatcacggcc
aacgagggtgccagaatcaacagccagcaggtcgacatcgactcggtcgtcaggctttct
ggtgcaggaacgcgctgggacaacagcggctccttccggaacagaaacgacctgaccctc
gaaaacggcgcagtgctgacgagtaacgagctgcgactgggttcggccgttgtcaaccgt
agcaatcaggtcaatgttaccggacagggcacccgcctcgacgcgcaaacgttgacgctc
ggcaccagcattgtccgtacttacctgacgctggccgacggtgccgaattgagcgccacc
aacggtatgctcatcagcctcgtgaacgacagcaacacggcgacgcgcggtacgcttgcc
atcggcggctcggtcgcggtggaccctgaccgtaccgatgtcgattccatgactgccggc
gcagctcaggcggcaggccgactgaacccgcaaaccgccgtcagctttggcaccggcaac
ggttccctggcgttcaaccataccgaccccgatctgcagttcgccaacacgctgaacgga
acgggtcgagtgtatgcgttcagcggaaacactacgctgagcggcgacacctcggggtta
gccggtagcgtcgttgtacgcggtgggcggctggtgttgtcagggaacgtcgaccaggtc
aatcagcgcggcaacacggccaccacccaaagcgtttcgcggtttaacgtaggcaacggc
accctggtggtcaacggcattgcgggccgcaccgagttcggaacctacaccaatagcgct
caggtactggacggaggtattctggctggcgtcggtcaagtgggcaccacccaggtctct
gccggcggtacgctgtcgcccggcgaaaacgccatcggcgcactggccatacaaggcgac
ctggacatggccgccggctcacgctacgccgcagacatcgccggcgacggcagggcagac
aagatcaacgtgagcggcacagcgaccctgcgcggtacgcaggtaaacgtgaccgcgctg
gatccagcgcaaagctatcagagcggcagaacctacaccctgctctccgctcagggcggc
ttggtcgacggcgctgccgcaggcactgcctatgcccaggcgctgaccaactcggcgttc
ctgaatgtcgggctgcaacgcaccgccaatgatctgaatctcaccatcgagcaaaaaagc
gtagagccgactcctacacctacacctacacctacgccaactccaactccaactccaact
ccagagcccacaccgacgccaaccccgactccaacaccaacaccagagcctgtaccgacg
ccaacccctacacccactccagaacctgcgccaacgcctgctcccgaacctgcccctgcc
ccgggcatctttcagacagtcatgctgacccagaaccagttcaataccgctggcgcgcta
agcgtactggcgcaaagcggcgaacccctgcgtctctacaacaacctgctggttctggac
gctgaaggggctcgtgacgctgccgatcaactgtccggcgactaccacagcagcacctcg
accgccctgatcgccaacagccaggtggtctccggcgttctgggcactcgtctgcgcaat
cttctggatacgggcacgctgcgcatgccagccatggcactcaatctgatgccaagcgca
ccgaccactcaaaacggcgcctgggtgcagccattcggcaactggaccaaggtagacggc
aataacggtgccggcggtctgcaacaaagcaccggcggcctgctgttcggggcggacggc
agctttacccctgactggcgcggcggcgtttacgccggctacagccgctcgaagttcgat
gccgataaccgcgatgctgacggccacagcgacaactatcatctgggcctctacaccggt
gctcagatcgacgctctgcgcctcagcgctgacgtcggttacacctggcacaagctggag
agtgagcggaatgtggcgtttgccggattcagtgaccacttgaccggcaagcgcaacgcc
cagtcgctgcaggccagtggcgaagcggcctaccgcataccgattggccgcgtggccctg
gagcctttcgccggcctgtcctacgtgcgctacgatgccaaggacatgcacgaaaaaggc
ggaccagccgctctggacgtgtccagcgataaacaggacaccttcttctcgacgttgggt
ctgcgcgcgtcgtcgaacatcgatgtggccaacatcaacactcaggtttacggctcgctg
ggatggagacgcgcctacggtgacctggacccgcgcaacatccagtccttcgccggcggc
ccgaacttcgaagtacaaggggtcgctcaagcccgcaacacggccctcactgaagtgggc
gcgaaactgcgcttgaatcagcgcaccgacctggacctgtcctaccaagggcagttcggt
accgacacgcgcttccattcggttaacgcgggggtgacggtccgcttctga
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integrated database retrieval system
