Pseudomonas syringae pv. tomato DC3000: PSPTO_1296
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Entry
PSPTO_1296 CDS
T00118
Symbol
oprB
Name
(GenBank) porin B
KO
K07267
porin
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_1296 (oprB)
Transporters [BR:
pst02000
]
Other transporters
Pores ion channels [TC:
1
]
PSPTO_1296 (oprB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AAO54820
UniProt:
Q887J6
LinkDB
All DBs
Position
1426129..1427490
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AA seq
453 aa
AA seq
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MKKINKGKSLSRFQLVSTLSVLGAMGLAGNVHAAEAFAADSPWMTGDWNGKRTELLDKGY
DFSLEYVSEMASNLKGGSNDDTTGRYSDQFALGMKVDLQKVLGWQDAEFKLAITERSGRN
ISNDRIGDPRAGTLSSSQEVWGRGQTWRLTQMWVKQKYFDGALDVKAGRFGPGEDFNSFP
CDFQNLSFCGSQVGNYVNTWYNWPISQWALRVKYNITPEVYAQVGVYEQNPSNLETGNGF
KLSGSGTKGMILPVELVWTPTVNSLPGEYRVGYYKSTPNADDVYEDVNGQPQAATGAAFK
SHDSKHGWWVVAQQQLTSHNGDASRGLSIFANATVHDKETNFVDNYQQIGLTYKGPFNSR
PKDDIGVGIARIHVNDDVQDRVRLANQISGINDFDNPGYLPVQSTEYNSEIYYGFHVTNW
LTVRPNLQFIKHPGGVDQVDDAIVAGIKIQSKF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcaacaaaggtaaatcgctttcccggtttcagttggtaagcacgctgtcg
gtgctgggtgcgatggggctggcaggcaacgttcatgctgccgaagcatttgctgccgat
tcgccgtggatgacgggcgactggaacggcaagcgtaccgaactgctcgacaagggttat
gacttctcgctggaatacgtttccgagatggccagcaacctgaaaggcggctccaacgac
gacaccaccggccgctacagcgatcagttcgcgctgggtatgaaagtcgatttgcagaaa
gttctaggttggcaggacgcggagttcaagctggcaatcaccgaacgtagcggtcgcaat
atctccaatgatcggatcggcgatcctcgtgccggcacgctcagttcctcgcaggaagtc
tggggtcgcggtcagacctggcgtctgacgcaaatgtgggtcaagcagaagtattttgat
ggcgcgctggacgtcaaggccggtcgtttcggaccgggcgaagacttcaacagcttcccg
tgcgatttccagaacctgtcgttctgcggctcgcaggtcggtaactacgtgaacacctgg
tacaactggccaatcagccagtgggccttgcgcgtgaagtacaacatcacgcctgaagtg
tatgcacaagtgggtgtctacgagcagaacccgtccaacctggaaaccggtaacggcttc
aaactcagcggcagcggcaccaaaggcatgatcctgccggtcgaactggtctggacaccg
accgtcaattctctgcccggtgaataccgtgtcggttactacaaaagcacgccgaatgcc
gatgacgtctatgaagacgtaaacggccagccgcaagcggctaccggtgctgcgttcaag
tcgcatgacagcaagcacggctggtgggttgtggctcagcaacagttgacctctcacaac
ggcgatgcgtcgcgcggtctgagcatctttgccaacgccactgtgcatgacaaggaaacc
aacttcgttgataactaccagcagatcggtctgacctacaaaggcccgttcaattcgcgt
ccgaaggatgacatcggtgtcggtattgcgcgtatccacgtcaacgacgatgtgcaggat
cgtgtacgtctggccaaccagatcagcggcatcaacgactttgacaaccctggttacctg
ccggtgcagagcactgagtacaactcggaaatctactacggcttccacgtcaccaactgg
ctgaccgtgcgtcccaacctgcagttcatcaagcatcctggcggcgtagatcaggttgat
gatgcgattgtggcgggcatcaagattcaatcgaagttctga
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