Pseudomonas syringae pv. tomato DC3000: PSPTO_3465
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Entry
PSPTO_3465 CDS
T00118
Name
(GenBank) KU domain protein
KO
K10979
DNA end-binding protein Ku
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PSPTO_3465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3465
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PSPTO_3465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
O_Spanin_T7
Motif
Other DBs
NCBI-ProteinID:
AAO56940
UniProt:
Q87ZG4
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All DBs
Position
complement(3910838..3911737)
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AA seq
299 aa
AA seq
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MARAIWKGAISFGLVHIPVALVSATTSNSVDFDWLDKRSMDPVGYKRINKVTGKEVTKEN
IVKGVLHEKDRYVVLSEEEIRSAHPKSTQTIDIFAFVDSQQIPLQNIDTPYFLTPDKRGE
KVYALLRETLVDTQKVALANVVLHTREHLAAVMPLESALVMVILRWPADVRELDALELTE
AVTDARLTKSERDMARRLVKDMSADWQPDQYHDTFQEKIMQLVQTKAGEGKIEDVETDPG
EEERKSADVIDLTDLLRRSLAGKSSASKTRKPAAKDKVADKQSPKPKRPAVRKKTGKAS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggcaatctggaaaggtgcaatcagcttcggactggtgcacatccccgtcgca
ctggtttctgcgaccacgtcaaacagtgtcgattttgactggctcgacaagcgcagcatg
gacccggtcggctacaagcgaatcaacaaggtcaccggcaaggaagttaccaaggaaaat
atcgtcaagggcgtgctgcacgagaaggaccgttacgtggtgctcagtgaagaggagatt
cgctctgcgcaccctaaatcgactcagaccatcgacatctttgccttcgtcgacagccag
cagattccgttgcagaacatcgatacgccttattttctgacccctgacaagcgtggcgaa
aaagtctatgcgctgttgcgcgaaacgctggtcgacacccaaaaagtcgcgctggccaac
gtcgtgttgcatacccgcgagcacctggctgcggtcatgccgctggagtcggcactggtg
atggtgatcctgcgctggcccgccgatgtgcgtgagctcgacgcactggagctgaccgag
gccgtaaccgatgccaggttgaccaagagcgaacgtgacatggccaggcgtctggtcaag
gacatgagcgcagactggcaacccgaccagtaccacgacacgtttcaggaaaagatcatg
caactggtccaaaccaaagccggtgaaggcaagatcgaggatgtcgaaactgatccgggc
gaggaagagcgcaagagcgccgatgtcattgacctcaccgatctgctgcgccgcagcctg
gcaggcaagagcagcgccagtaaaacacgcaagcctgctgcgaaggacaaggtcgcagac
aagcaaagccctaagccgaaacgacctgccgtgcgcaagaaaaccggcaaagcttcttga
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