Pseudomonas syringae pv. tomato DC3000: PSPTO_5137
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Entry
PSPTO_5137 CDS
T00118
Symbol
priA
Name
(GenBank) primosomal protein N`
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPTO_5137 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_5137 (priA)
Enzymes [BR:
pst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSPTO_5137 (priA)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPTO_5137 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
HypA
AAA_30
zinc-ribbons_6
RUBY_RBDX
PIF1
TrwB_AAD_bind
ADDB_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAO58564
UniProt:
Q87V04
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All DBs
Position
5846150..5848369
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AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRSALQPGMRLRVPFGRREMIGILVEVVDHSEVP
ADKLKPAIALLDSEAPLPPALFKLCLWTSQYYQHSLGDTLSWALPGLLRQGELAESRQER
FWHVAANASVDDPRIARAPKQREALTTLAQHPHGVAHQLLGKLLLNKDSLNLLLAKELVY
VEVRSHAPSARHEHWLAQPELPLNTEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNQRAGGAQQPRFMRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCQRCDARMTVHQRSGELRCHHCGYVERVPRQC
PSCGKVDLRPVGAGTERAEERLAILFPDFPVLRVDRDSTSRKDAMNQLFATIQRGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFSHLALLRAEAHKPGQAEAFLDQA
CSDAEQLVAQMQLGGIELLGPIPAPMERRAGRYRAQLLVQSSARAPLHKLLGSWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgccttgccctgccctcgccgcttcgccgcctgttcgactac
cgtgccccggcgggcgtgctgcgcagcgccttgcagccgggcatgcgtctgcgggtgccg
ttcggacggcgagaaatgatcgggattctggtggaggtggtcgatcacagcgaagtgccc
gccgacaagctcaagcccgccatcgccctgctcgacagcgaagcaccgctgccgcccgcg
ctgttcaagctgtgcctgtggacgtcgcagtattatcagcacagcctgggtgacacgctg
agctgggcgctgcccgggctgctgcgtcagggcgagctggccgaaagccgccaggaacgc
ttctggcatgtggccgccaatgccagtgtcgatgacccgcgtatcgcccgtgcgcccaag
cagcgtgaagcgctgaccaccctcgcccagcacccgcatggcgtggcgcatcaactgctc
ggcaaactgctgcttaacaaggacagcctcaacctgttgctggccaaagaactggtatac
gtcgaggtgcgcagtcacgcgcccagcgcacgccatgaacactggctggcgcagccggag
ttacccctcaacaccgagcaacgcgccgcttacgaagccattcgtgccgggttcgacagc
ttccatgcgtttttattggcgggcgtcacgggcagtggcaagaccgaagtctatctgcag
ctgattcgcgaaacccttgaagccggcaaacaggcgctggtgctgatcccggagatcaac
ctgggaccacaaaccctggcgcgctttgaacaacgtttcaatgcccgcatcgcgctggtg
cactcggccgtcaacgaccgtgaacggctggatgcctggctggccgcccgcgatggcgaa
gccgacattattatcggtacgcgctcagcattattcacgccgatgaagaaccctggcctg
atcatcatcgacgaagaacacgacggctcctataaacagcaggaaggcctgcgctatcac
gcccgcgacctggcgctggtgcgggcacgccaggaaaacatcccgattgtgctcggctcg
gccacgccctcactggaaagcctgcacaacgcctacaccggacgctatggcctgctgcgc
ctgaaccagcgcgcaggcggcgcgcaacagccgcgcttcatgcgtctggacgtcaagagc
aggccgctggacagcggcatttccggtccgatgcaacaggccatcggccagaccctggca
gcaggtcagcaagtgctggtgtttctcaaccgccgcggctttgcgccgaccctgctgtgc
catgactgcggctggatgtccggctgccagcgctgcgatgcacgcatgacagtgcaccaa
cgctcgggcgagttgcgttgccaccattgtggctatgtcgagcgtgtgccgcgccagtgt
ccgtcctgcggcaaggtggatttgcgcccggtaggcgcaggcaccgaacgcgccgaagag
cggctggcgattctgttcccggactttcccgtgttgcgcgtcgaccgcgacagcacctcg
cgcaaggacgccatgaaccagttgttcgcgaccatccagcgcggtcagccgtgcattctg
gtcggcacgcagatgctcgccaaagggcatcactttccccgtgtgacgctggtgtcgatt
ctggacgccgacggcgggctgttttccggtgacttccgcgccagcgagcgcatggcgcag
ctgattgtgcaggtggccgggcgtgccgggcgtgccgaagagccgggcaaggtgatcatc
cagactcatctggccgaccatccgctgttgatccagctcaccgaacagggctatttcgcc
ttcgccgaacaagccctgagcgaacgccgctcggcgggcctgccaccgttttcccacctt
gcgctgctgcgcgccgaagcacacaaaccggggcaggccgaggcctttctcgatcaggcc
tgcagcgatgccgagcagttggtggcgcagatgcagctgggcggcatcgagctgctgggg
cctattccggcaccgatggagcgccgcgccgggcgttatcgggcgcagttgctggtgcag
tccagcgcgcgcgcgccgctgcacaaattgctcggcagctggctgctggcactggagcaa
atgcccagcgggcgacaggtccgatggtcgctggatgtggacccggtggatctttattaa
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integrated database retrieval system
