Pseudomonas syringae pv. tomato DC3000: PSPTO_A0049
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Entry
PSPTO_A0049 CDS
T00118
Name
(GenBank) DNA primase, putative
KO
K06919
putative DNA primase/helicase
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PSPTO_A0049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPD7
DUF5710
Motif
Other DBs
NCBI-ProteinID:
AAO59073
UniProt:
Q88BM2
LinkDB
All DBs
Position
pDC3000A:47811..51980
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AA seq
1389 aa
AA seq
DB search
MKIETAPRTSEYPVWLAVPPDDREKARLSAGRLSDGRAAIAWNKEEKLWFARPGCDLDRI
TAWLPDPSRRAGGGDAESEFLDVLTQAGLVVKGMPVMDGSRQRVATVDDKHGKKSGVYCG
FLDRRPAGWFINYHRADSPKDVTNWAATGGESDPITRLHIRAGAKQAQEDAARDRAVTYA
KQTLAAKRLYDRLPAADPAHPYLVRKGIPPTPDIRQTRNGALVVPFFNASGTFKTLQYIP
PEGEKFLFKDAPKQEHFLVVGGSLDPVNPILYAEGYATARSLNLATGLPVVMTIDAGNMV
AVAKVLHQQYPDSRHLFMADFDHAKDVNKGLIMANEAAIAVGGQVLYPTFNDAEIARGFT
DFNDLHQSRGLDAVREQTAPLIRPYEEVTTMPTDSNTQSPDNTAQKVATPAQETLELDAA
PAASIQVPDQSAPPQTRSAQPVASEASSVESQSPETAQVTEAPVGIDDAQVSTQPPLALS
PAEQLASVEADPDASAIVDEQPKATMSVATDRNTPSDAPELTQPTSAEVVPEQSNETAQP
DARSAQQQAPGEADPGSSANVDDQKRAAPPAATDQEMSSDAPVLNQPPLAAAEPEQSNET
AQQQAPGEADPGSSANLDDQKRAAPPAATDQEMSSDAPVLNQPPLAAAEPEQSNETAQQQ
APGEADPGSSANVDDQKRAAPPAATDQEMSSDAPVLNRPPLAAAEPEQSNETAQPAAPPA
KQQASVEADPDTSPVAEDQPIIAPAGPAQNEDNESLSDVEVPVSGALPRRFTTARKTGPA
VVPDAIFVGAPIGADEPQLQASNIDKDALLARISREVQGDNSVLYKLDAEPAFVDRGSRL
EMVQGAGQEDEKVIAALLTAAQFYRGRIELTGSDEFKAKAIELIAQHQINVEMKNPAQQM
LLDDARNALKQPPVTLDAIHGDTPPPYGGPQPSQAKPSAPQPQQAAPAPVHSSAPAPAST
AYQPLEVEGLQRRPAQSAPQAQAPQAGVAPQPQQAAPVHSSAPASASTAYQPLDVEGLQR
PLVQPAPPAQPDAPVINPPSAAPASDQPATSANQQVSPAIHQPFQAAKDGVTGKILKFGQ
KPFRFEPDKPESTFITLRTVNGVQTFWGKELAGLLRQTRVQPGKMVTLQWLGNHPVTVKV
PRKNEQGVTVGYDDKDVHRNQWALKVEGNPAVRSGQDEGVKLGAYDAGRFAVVQQAWLAQ
LGVEAPLPTPPTDGLYWLTPNGEGSAKTGDELSAPRPPIDPNNTAGQPVISSWSRDGHLD
MYLVRGDGPYLQGVVRQGDQMQHVLVSLPGRDDGPSMVFNAITPEGLLPIGTGNGINRSG
GEPVSREHIAFKLEGDSAVRIGKLDAPGEVPPTLHNLLGFDQRWKEENTLPKSAPTAAPS
VQPSDPRPV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaaacagcccctcgcacatccgaatacccggtctggttggcagtgccgcct
gacgatcgtgaaaaagcacgtctgtctgctggacgactcagtgacggtcgtgcggctatt
gcctggaacaaagaagaaaagctttggtttgccagacctggatgtgaccttgatcgcatc
accgcctggttgcctgatccaagccgccgtgccggtggtggtgacgccgaatcagagttt
ctagatgtactgactcaagccggcctggtggtcaaaggcatgccggtgatggacggtagt
cggcagcgtgtcgcgacggtcgatgacaagcacggcaagaaaagcggcgtctattgtggc
tttctggatcgtcgccctgcaggctggttcatcaactaccaccgtgccgattcgcccaag
gatgtaaccaactgggcggcgactggcggtgaatctgatccgatcacccgcctgcacatt
cgggccggggccaagcaagcccaggaagacgccgctcgtgatcgcgctgttacctacgcc
aagcagacgttggctgccaagagactttacgaccggctgcccgccgcagaccctgcgcac
ccctacctggtgcggaagggaatacccccgacgcccgacattcgtcaaacacgaaacggt
gccctggtggtgccgttttttaatgcctcgggaacgttcaagacgctgcagtacatccca
cccgagggtgagaagttcctcttcaaggatgcccccaaacaagagcatttcctggtggtg
ggcggctcgctcgatccggtcaaccccatcctgtatgccgagggctatgccactgcgcgc
agcctgaacctggccaccggcctgccggtggtgatgaccattgacgccggcaacatggtg
gcggtggccaaggtgctgcatcagcagtatcccgacagtcggcacctgttcatggcggat
ttcgatcatgccaaggacgtgaacaaggggttgatcatggccaatgaggcggccatagcg
gtggggggccaggttctgtatccaacgttcaacgacgccgaaattgcccgtgggttcacg
gacttcaacgaccttcaccaatcacgaggactggacgcggtgcgcgaacagaccgctccc
ctgattcgaccgtatgaagaggtaactaccatgccgacagattcgaacactcagtctccg
gacaatactgcgcaaaaggtagcaactcccgcgcaagaaacgctggaactggatgcagcg
cctgcagcttcaatacaggtcccggatcaatccgcaccgccgcagacccgtagtgctcaa
ccggttgcatctgaagcgtcatctgttgaaagccagtcgcccgaaactgcccaggtcact
gaagcacctgttggcattgatgatgcgcaggtatccacccagccacctttggcgttgtca
cctgctgagcaactggcgtcggtagaggccgatcctgacgcttccgcgatcgttgacgaa
cagcccaaagcgacaatgtctgtggcgacagaccgcaacacgccgtctgacgcgcctgaa
ctcacccagcctacctcggcggaggtcgtgccagagcagtctaacgaaaccgctcaacca
gatgcgcgctctgctcaacaacaggcaccgggagaggccgacccaggctcttctgccaac
gtggatgatcagaagagggcggcaccacctgcggcgacagaccaagaaatgtcctctgac
gcgcctgtactcaaccagccacctttggcggcggccgagccagagcagtcgaacgagact
gctcaacaacaggcaccgggagaggccgacccaggctcttctgccaacttggatgatcag
aagagggcggcaccacctgcggcgacagaccaagaaatgtcctctgacgcgcctgtactc
aaccagccacctttggcggcggccgagccagagcagtcgaacgagactgctcaacaacag
gcaccgggagaggccgacccaggctcttctgccaacgtggatgatcagaagagggcggca
ccacctgcggcgacagaccaagaaatgtcctccgacgcgcctgtactcaaccggccacct
ttggcggcggccgagccagagcagtcgaacgagaccgctcaaccagctgcgcctcctgct
aaacaacaggcgtcagtagaggctgatcctgacacttcccccgtcgctgaggatcaaccg
ataatcgcaccggcagggcctgctcaaaacgaagacaatgaaagcctttcagacgtggag
gttccggtgtcaggggccctgccgcgtcgtttcaccacagcacgcaagaccggcccggcg
gtcgtaccggatgctatcttcgtaggggctccgataggtgccgacgagccacaactgcaa
gccagcaacatcgacaaagacgctctgttggcccgcatcagccgtgaggttcaaggtgac
aattcggtgctctacaagctcgatgccgagcctgctttcgttgaccgtgggtcgcgcctg
gagatggtccaaggcgcaggtcaggaagatgagaaggtaatagctgcgttgctcacggca
gcacagttctaccgggggcgcatcgaactgaccggcagtgacgaattcaaggcaaaagcc
atcgagctgattgctcagcaccagatcaatgtggagatgaagaaccctgcgcagcaaatg
ttgctggacgatgcccgtaacgcgttgaagcagccacctgtaacgcttgatgccattcat
ggtgataccccaccgccgtatggtggtccacagccgtcacaggcgaagccctcggcaccg
caacctcaacaagccgcgccggcaccggtgcattcgtctgcgcccgcgccggcgagtacc
gcttaccagcctctggaggttgagggtctgcaacggcggccggctcaatctgccccacag
gcacaggccccgcaagcgggcgttgcaccgcaacctcaacaagccgcgccggtacattcg
tctgcgcccgcttcggcaagtactgcttatcagccgctggacgttgagggtctgcagcgg
ccactggttcaacctgcaccaccggcacagccggacgcaccggtcatcaatccgccctcg
gcagctccagcatcggatcagcctgcaacgtcagcgaatcagcaggtgtcgcccgccatc
catcagcctttccaggcggccaaggatggcgtgacaggcaagatcctcaaatttggccag
aagccgtttcgttttgagccagacaagcccgagagcaccttcatcacactgcgtaccgtg
aacggtgttcagactttttggggcaaggagctggcggggctgctgcgccaaacccgtgtg
cagccaggcaagatggtgacgttgcagtggctgggcaatcatccggttaccgtcaaggtg
ccccgcaaaaacgagcagggcgtcaccgtgggttacgacgataaagacgttcatcgcaac
caatgggcccttaaggtagagggtaaccccgcagtgcgttctggccaggatgagggcgtc
aaactcggcgcctatgacgccgggcgtttcgccgtggtgcaacaagcctggcttgcgcaa
ctgggcgtggaggctcccttgcccacgccacccacggatggcctgtattggttgacccca
aacggtgaaggcagcgcaaaaacgggtgatgagctgtcagcccctcggccgccgatcgac
cccaacaacacagcgggacaacccgtcatcagcagttggtcacgggatggccatctggac
atgtacctggtgcgcggcgatggtccctatctgcaaggtgtggtgcgtcagggggatcag
atgcagcatgtattggtgagtcttccaggccgtgacgatgggccttcgatggtgtttaac
gccattacccccgagggactgctgccgatcggcacgggcaatggcatcaaccgctctggt
ggcgagccggtgtcgagagagcacattgccttcaagcttgaaggcgacagcgctgtgcgc
attggcaagcttgatgcgcctggcgaggtgcccccgaccttgcacaacctattgggcttc
gatcagcgctggaaagaggaaaacaccctcccaaagtcagctcccacagcggcaccgtca
gtacagccgagcgatccacgtccggtgtaa
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