Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_011196
Help
Entry
Pst134EA_011196 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03022
Basal transcription factors
pstr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pst134EA_011196
09124 Replication and repair
03420 Nucleotide excision repair
Pst134EA_011196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_011196
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_011196
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pst134EA_011196
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pst134EA_011196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Motif
Other DBs
NCBI-GeneID:
72026364
NCBI-ProteinID:
XP_047807008
LinkDB
All DBs
Position
6:723235..725389
Genome browser
AA seq
464 aa
AA seq
DB search
MGRAEDSESEEELDGEWEPGTRTGRARTRGAQIDRAKEGGGQKKHKKKATAYASKDGEGY
SWEEEYKRSWDVLREDESGSLESAVNQLIANKRRRVIRDTTSIQRGIIRHLCLIIDVSLA
MTDRDLRPNRLDMSLTYAKEFVTEFFDQNPISQLCILITKDAVAERLSGLSGNPLDHHKA
LSNKAKLTPSGEPSLQNSLEMARASLAHLPTHGSREVLVIFGSLTTCDPDDINKTLENLE
KDRMRVSMVGLAAEVRICKEICKRTQGQYGVILNEHHFKELLFEAISPPPISKSTTSGPK
TQSSSLIQMGFPNKISHDHHSVNSSSHSFCACHSKLQSTGFICPRCGSKNCEIPTNCCVC
GLTIVSSPHLARSYRHLFPVGNWIEKNSNSLSDEKLKCFGCDKELHINKPTQSHGKNLDN
GTRNNVAHNINSSINLYHCPRCKNLFCYDCDLYHEQLGLCPGCC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagcggaggacagcgaatcggaagaggaactggatggggaatgggaaccagga
actaggacaggaagagcaagaacgagaggagctcagatagaccgagccaaggaggggggc
ggacagaagaagcacaagaagaaagcgactgcctatgccagtaaggacggagaaggatac
tcatgggaagaagaatacaagcggagttgggatgttctcagggaggacgagtcgggaagt
ctggaaagtgcagtcaatcagctgattgctaacaaacgacggagggtcatacgggatacg
acttccatacagcgaggtatcatcagacatctatgtctcataatcgatgtttcgctggcc
atgactgatcgagaccttcgtccgaaccgactggatatgtccctgacttatgctaaggaa
ttcgtaaccgagttcttcgatcaaaatccaatcagtcaattatgtatcttaatcaccaag
gacgcggtcgccgaaaggttgagtggattatcaggtaatccattggatcatcacaaggca
ctcagcaataaagctaaattaactccatctggagaaccttcattacaaaactcattggag
atggctagagctagtttagcacatctgcccacgcatggttcaagggaagttctcgtaata
tttggctcactcactacatgcgatccagatgatatcaataaaactctagagaatttggag
aaagaccgaatgagagtctcgatggtgggcttagctgcagaggtaagaatttgtaaggag
atatgtaaacgaacacaaggtcaatatggtgtaatcttaaacgaacatcatttcaaagag
ctattgttcgaggcgatctcaccgcctccgatatccaaatcgacgacgagtggaccgaag
acgcaaagctcaagtttaatccaaatgggtttcccgaataagatctcacacgatcatcat
tcagtcaattcatcctctcattcattctgcgcttgtcattctaaacttcagtctactggg
tttatttgtcctcgttgtggatctaagaattgcgaaattcctaccaattgttgcgtttgt
ggtttgactatcgttagctctcctcatctcgctaggagctatcgtcatctctttcctgtt
ggtaattggatcgagaagaattccaattctttgtcggacgagaaactgaaatgtttcggc
tgcgataaagaattacatatcaataaaccaactcaatctcacgggaaaaatttagacaat
ggtacccgtaacaatgtcgcccataatattaattcatcgatcaatttataccattgtcca
cgatgtaaaaatttgttttgttatgattgcgatctttatcacgaacaattaggattatgt
cctggttgttgttaa
DBGET
integrated database retrieval system
