KEGG   Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_011276
Entry
Pst134EA_011276   CDS       T09520                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pstr  Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03030  DNA replication
pstr03410  Base excision repair
pstr03420  Nucleotide excision repair
pstr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pstr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pst134EA_011276
   03410 Base excision repair
    Pst134EA_011276
   03420 Nucleotide excision repair
    Pst134EA_011276
   03430 Mismatch repair
    Pst134EA_011276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pstr03032]
    Pst134EA_011276
   03400 DNA repair and recombination proteins [BR:pstr03400]
    Pst134EA_011276
Enzymes [BR:pstr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Pst134EA_011276
    6.5.1.6  DNA ligase (ATP or NAD+)
     Pst134EA_011276
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Pst134EA_011276
DNA replication proteins [BR:pstr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pst134EA_011276
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Pst134EA_011276
DNA repair and recombination proteins [BR:pstr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pst134EA_011276
   NER (nucleotide excision repair)
    Other NER factors
     Pst134EA_011276
   MMR (mismatch excision repair)
    Other MMR factors
     Pst134EA_011276
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Presenilin
Other DBs
NCBI-GeneID: 72026444
NCBI-ProteinID: XP_047807094
LinkDB
Position
6:complement(1157972..1161236)
AA seq 836 aa
MLRNISHNPRRVLAATITLRTRLGPIFIRSYHSHYPWTKIHKMVNPTSSSSNGPTKQITL
NKFFTKPAGHKPVLVQATVNSLFNKQNRKKSEEDLSKDVHDLKRSPPIDNEDDAGRSSKR
AKSTQKDEEQKVEGLSKQLKKMSDTQVEGEKGNENNDQPTNKVIQEESSEEEEEEDLAEL
ACEDTQEEEGVRWEKGKPIPYASLAHTFNLIDGTTKRLEITKHLTQYLIQVIDRTPNELL
KVIYLCINRLCPDYEGIELGIGESLLIKAIGSSMGRSIAQVKADFKKVGDLGSVAQNSRT
TQKTMFKPKLLTVNSVYQDLKTIATTSGHSSQAKKVGIITKLLASCQGEEAKFIIRSLEG
KLRIGLAERTVLVALANAAVRTGVGNTSNSKRKASSDTLAKEIVEGVEIVKAVFSEIPSY
DLVIPALLQGGIKGLRKNCKLTPGVPLKPMLAKPTKAISEVLDRFEGQKFTCEFKYDGER
AQIHYLSDGSISIFSRNSENMSVKYPDMLDQLPRAIKKEITTNFVLDAEAVAWDRVTKKI
LPFQELSKRKRKEVKAEDITIQVHIFAFDILYLNDQPLINTDFSNRRTLLKQHFNEIEGE
FSFATSVDVDNVDEIQSFLDHSVSAGCEGLMVKMLDGESAHYEPSRRSMNWLKVKKDYLA
GIGDSLDLVVVGAYYGKGKRTNVYGAFLLACYDPESETYQTICKLGTGFTEEDLDSHYKK
LVPLELTTKKNYYDIGDSKADVWFEPKIVWEVLAADLSLSPVYSAAKGLCGDGSRGISLR
FPRYIKEREDKSAEDATVSDQVAEMYKKQVTVNSDLGPNKKKGKKGSKDDVDDDFW
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgctcaggaacatatcccataaccctcgtcgcgtcctggcagcaacaataacactcaga
acacgcttgggacctatttttattcgatcctaccactctcactatccttggacaaagatt
cacaagatggtgaaccctacatcttcgagctcgaatggtccaaccaaacaaatcacactc
aataaattcttcactaaacctgctggtcacaagcctgtcctcgtccaagcaactgtgaac
agtctcttcaacaaacagaatcgcaaaaaatcagaggaagatttgagtaaagatgtgcat
gatcttaagcggtcaccaccgatcgataatgaggatgacgcggggaggagctcaaaacgc
gctaaatctacccagaaggatgaagagcagaaagttgagggactttcgaagcaattaaag
aaaatgtcagacacccaggttgaaggagaaaaaggaaacgaaaacaatgaccaacctaca
aacaaggtgatccaagaagaaagctcagaagaagaagaagaagaagatctagcggaatta
gcctgtgaggatactcaagaagaagaaggagtaaggtgggagaaggggaaaccgatccca
tatgcaagtttagctcatacattcaatctaatagatggtacaacgaaacgactagagata
accaaacatctaacccaatatctaatacaagttatcgatcgaacacccaacgaattatta
aaagtaatatacttatgtatcaatagattatgtcctgattatgaaggcatcgagttaggg
ataggtgaatcattattgatcaaagctattggttcttcgatgggtagaagtattgctcaa
gttaaagccgattttaagaaagtgggcgatctgggtagcgtggctcaaaatagtagaact
actcaaaaaactatgttcaaacctaaacttttaactgttaatagtgtctatcaagatttg
aaaactattgctactacttcaggtcattcatctcaagctaaaaaagtaggtattattact
aaattattagcctcttgtcaaggtgaagaggccaaattcattatcagatcattagagggt
aagcttcggattggattagccgaacggacggtcttagtagcacttgcgaatgcggcggtc
aggactggtgttggtaacacgagcaattccaagcgtaaagcttcatcagatactctagcg
aaggagattgtagagggagtcgagatcgtgaaagcagtattctcggagatcccttcctac
gatctggtcatacctgcattacttcaaggaggtatcaagggactcaggaagaattgtaaa
ttaacacccggcgtgcctttgaaacccatgctcgctaaacctactaaggctatctccgag
gtcttggatagatttgagggacaaaaattcacttgtgaattcaaatatgatggcgaaaga
gctcagatccattatttgagcgatggatcgattagtatctttagtcgaaattcagagaat
atgagtgtcaaatatccggatatgttggatcaattaccacgagctatcaagaaagagatc
acaacgaatttcgtattagatgcagaagctgtagcatgggacagagtaacgaaaaaaatc
ctaccattccaagaattaagtaaacgtaaacgtaaagaagtcaaagctgaagacataacg
atccaagtgcatatctttgcattcgatatcctctacctcaacgatcaacccttaattaat
accgacttcagtaaccgtagaacgttgttaaagcaacattttaatgagatcgagggggaa
tttagttttgctacttcagttgatgttgataatgtggacgaaattcagtcgtttcttgat
cattctgtcagcgctggttgtgagggtttaatggttaagatgttggatggtgaaagtgcg
cattatgaacctagtagaagaagtatgaattggctcaaagtaaaaaaagattatctagca
gggataggagattcattagatttagtggtagtcggggcatactacggaaaagggaaaagg
acgaatgtttatggggcgtttctactagcatgttatgatcccgaatctgaaacatatcaa
acgatttgtaaattaggtactggatttactgaagaagatttagattcacattataagaaa
ttagtacctctagaactcacgaccaagaaaaattactacgatatcggtgattctaaagct
gatgtctggttcgaacctaagatcgtttgggaagtcttggccgctgatttaagtcttagt
cccgtttatagtgctgctaaaggtctatgcggtgatggtagtcgaggtatatcattaaga
ttccctcgttatattaaagagagagaagataaatcagccgaagatgcaacggtatcagac
caggttgctgaaatgtacaagaaacaagtcactgtcaattcggatcttggacctaacaaa
aagaaaggtaaaaaaggctctaaagacgatgttgatgatgatttttggtaa

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