Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_031371
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Entry
Pst134EA_031371 CDS
T09520
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Pst134EA_031371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_031371
Enzymes [BR:
pstr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Pst134EA_031371
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Pst134EA_031371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
DNA_ligase_A_C
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
72036571
NCBI-ProteinID:
XP_047796590
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MEIKIKSEDGGENEFKTVSVTQERDNQDPLRAIGPSPPFHDFCKVLNLIAAKKKTKACSL
PANRRKCLLNLFDDWRKKYGNDLYPCIRLLLPAEDRERPTYFLKEFRLARLYCIALGLDR
KTSSTAKRLLNWRSDATDTNQVDKESTAGDFAKLLFREISSRSLVNKTIFSIDDINKHLD
SLAAADTEAKRLEIIKIWLNEVAPADHLWLIKIVLQDIGLGLKENFVLKCFHHNAIELYN
VCTDLKIICHTLYSPDVPLEDRAVTLKSFNVFKPMLAKRSAKDLPDIVKLMTSGRHKEFL
IEEKMDGERIQIHKSGEQYQYWSRNGKNYTDLYGANPATGRLTPYIHSAFKPSVDEVILD
GEMLAWDPVKEKIMAFGTVKSLTSSNNREQPRALFKVFDILYLRGKGKPQGTSFINKCLF
DRRAVMESGRVFVEIKTRLEFCYSVRGTDTNDIKKSLEKVLEERGEGLIIKRLGSTYQLN
GRSDDWYKVKPEYMDELGETFEVLAVGGYWGRGKRGGTFGSFLVAMIDNENSDPSQGIFR
YRTLCGVGTGLNLNETKQIMTKLEGKYTEWDKKRTERNPDWLDLGPGSGMTPDVWWHWKD
SFLLTIKGAEIIPSSAYGCRCSIRFPRSIRFDIERDIQECMSYEELLGIAGKPHDKEALS
NNLSGHVRKRKRNESSQPTSSLRPLKRSDSHKMFFGVEFWVLQGLEGTAESKSELEVMLN
HNGGKIIHTIPRPAPDREHFCVTRRTDFWDAEKAIRHGLNLVHPQWVYDSVKAGYRIGLS
SAKYVVNMAQAQDGNTIPEHTSVTVKEERDSEDHDDSADKQSNATCDGEDPQSEAEDPQS
EEEDPESEEEDPQSEVEDLQSMSGDRRSEASATENGGRDDDVREDLSHLAQKKVERSVSE
PEKPSDCKDVPSLIDKPSGIGSRAQVKEGIFYPLVFYLDNQPIIPQKSNVAIDQTVSDDP
DGTKSNQLFDRVSQLIENHGGRIVSDVNDADTTHIILDPNDTSRYIDLIRMDKDRQKRRR
LVLADWVFESVESESCLYEADYLP
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaagatcaagtctgaagatggtggcgagaatgaattcaagacagtttcagtg
acacaagaacgtgataatcaagatcccctgcgagccattggtccctcgccgccattccac
gatttctgcaaggtgctcaacctcatagccgctaagaaaaaaacaaaagcatgctctctt
ccagcgaatcgtcgcaagtgtttgttgaaccttttcgacgactggcgcaagaaatacggc
aacgacttatatccttgcatccgactgcttctaccagccgaagatagagagcgaccaacg
tactttctgaaggaattccgattagcacgattgtactgcattgcactaggcttagacagg
aaaacttcctcgactgctaagaggttactaaattggaggagcgacgcgactgatactaat
caggtcgacaaagagtcaacggccggtgacttcgcgaaattactgttccgagaaatctct
agtcgatccctagtcaacaaaaccatcttctccatcgacgatatcaataaacatctagat
tcactggccgcagcggatacagaggccaagagacttgaaataattaagatttggctcaac
gaggttgctcctgcggatcacctgtggttgatcaagatcgttctacaagacatcggatta
ggactgaaagaaaattttgttttgaaatgtttccatcataatgcaatcgaattatataac
gtctgtacggacctcaagattatttgccataccctttattctccagatgtcccactggag
gacagagcagtcacgttgaaaagcttcaatgtcttcaaaccgatgcttgcaaaaaggagc
gccaaagatctaccggatatcgttaagttaatgacatcaggcagacataaggagtttttg
atcgaagaaaagatggatggtgaacggatacaaatccataaatctggggaacaatatcaa
tattggtcaaggaatggtaaaaattacacggatctttatggtgccaatccagcgactggt
cgtctgaccccatatattcacagcgctttcaaaccatcagtcgacgaagttatactagac
ggagaaatgctggcatgggatccggtgaaggaaaaaataatggcgttcgggactgtgaaa
tcattaacttcttccaataaccgtgaacagccacgggcactgttcaaggtgtttgatatt
ttgtatctcagaggcaaaggaaaacctcaaggtacaagcttcatcaacaagtgtttgttc
gacaggcgagcagtaatggagagtggaagagttttcgtcgagatcaagaccagactggag
ttttgctattccgtccggggtacagatacaaatgatatcaagaagagtcttgagaaagtc
ttggaggaaaggggtgaaggattaatcatcaagagacttggttctacatatcagctcaac
ggtcgatcagatgactggtataaggtcaagccagaatatatggatgagttgggagaaact
tttgaagtcttggcagttggtggatactggggacgaggaaaaaggggcggaacatttggc
agttttctcgtagccatgattgacaatgagaactctgatccatcgcaaggcatattccgc
tatagaaccttatgtggcgtagggacgggactaaatctgaatgaaacgaagcaaatcatg
acaaaactagagggaaagtatactgaatgggataagaaacggacagagcgcaaccccgac
tggttggacttggggccaggctcgggaatgacacctgatgtgtggtggcactggaaagat
tcatttttacttacgatcaaaggtgcagaaattatcccttccagtgcctatggatgccga
tgttctatccgatttcctagatccattcgcttcgacattgagagagatatccaagagtgt
atgtcttacgaagagcttctgggtatcgcgggtaaaccgcacgacaaggaggcactcagt
aataatctcagtggacatgtgaggaaacgcaagcgaaacgaatcatctcaaccgacctct
tcactccggccgctgaagcgcagcgattctcacaagatgttttttggagtggaattttgg
gtgctccaaggcttggagggcactgccgaaagtaaaagtgaattagaggttatgctgaat
cacaatggaggaaagatcattcacaccattcctcgaccagcgcctgaccgcgagcatttt
tgcgtcacccgcagaacagatttctgggatgccgaaaaggcaatccgccatggcttgaac
ttggtccacccacaatgggtctatgattcagtgaaggcaggctacaggataggtctgtca
tctgccaaatatgtggtcaacatggcccaagctcaagatgggaacactatcccagagcat
accagtgtcaccgtaaaggaagaacgtgactcggaggaccatgacgattcggctgacaaa
cagtctaatgccacctgtgacggtgaagaccctcagtcggaggcggaagaccctcagtca
gaggaggaagatcctgaatcagaggaggaagatcctcaatcagaggtggaggatcttcag
tcaatgtcgggggatcgtcgttcagaggctagcgccactgaaaatggaggccgtgacgat
gatgtccgggaggacctgtctcacttggctcagaaaaaggtcgagagatcagtatctgaa
ccggaaaagccctcggattgcaaagatgtaccctcgcttatagataagccatcgggaatc
ggatcacgggcgcaagtcaaagaagggatattttatccacttgtattttacttggataac
cagccaataattccacaaaaatccaatgttgctattgaccagaccgtgtcagatgacccc
gacggtacaaaatctaaccaactttttgatagagtttctcaattgatcgaaaatcatggt
ggccgaatcgtatccgacgtgaacgacgccgatacaacacacatcattcttgacccgaac
gatacctcgagatatatagatctcatcaggatggacaaggatcgccagaaaagacggaga
ttggttctggcggattgggtgtttgaatcggttgaatccgagtcttgtttatacgaagct
gactatttaccgtga
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integrated database retrieval system
