Stutzerimonas decontaminans: UIB01_06050
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Entry
UIB01_06050 CDS
T03366
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UIB01_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_06050
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UIB01_06050
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UIB01_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HAMP
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHY42069
UniProt:
A0A023WQM0
LinkDB
All DBs
Position
1292895..1294910
Genome browser
AA seq
671 aa
AA seq
DB search
MSKFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERSDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRDSGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
IEVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAMDETERRRNKQIAFNEANGIVPQGVKKDVRDILEGATV
PGSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEARDE
IHKLRERLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttcgaactggtcacccgtttcaagccggccggcgatcagccggaggccatt
cggcagatgatcgaaggcatcgaagcggggctgtcgcaccagacgctgctgggcgtgact
ggctccggcaagaccttcagcatcgccaatgtcatcgctcatgtgcagcgccccacgctg
gtgctggcgccgaacaagacgctggccgcgcagctctatggcgaattcaaggcgtttttc
ccgaacaatgcggtggagtatttcgtctcctactacgactactaccagccggaagcctat
gtgccgtcttcggacaccttcatcgagaaggacgcatcgatcaacgatcacatcgagcag
atgcggctgtcggcaaccaaagcgttgctggagcgatcggatgcgatcatcgtcaccacg
gtgtcgtgtatctacggtctgggtgatccgcagtcctatctgaagatggtgttgcatgtg
gatcgcggcgatcggctcgaccagcgcgaactgctgcgccggctgaccggcctgcagtac
acgcgcaacgacatggattttgcccgtgcaaccttccgtgtacgcggcgatgtgatcgac
atctttcccgccgaatcggacctcgaagccgtgcgcatcgagttgttcgacgacgaggtg
gagagcctgtcggccttcgacccgctgacgggggaggtaatccgcaaactgccgcgcttt
accttctatcccaagagccattacgtgacgccgcgggagacgctgctcgacgccatcgag
aagatcaaggacgagctgcgcgagcgcctcgactacctgcgtagccagaacaagctggtg
gaggcgcagcggctggagcagcgtacccgcttcgatctggaaatgatcatggagctcggc
tactgcaacggcatcgagaactactcgcgctacctctctgggcgcgattcgggtgagccg
ccgccgacgctgttcgactatctgcccgccgatgcgctgctggtgatcgacgagtcccac
gtttcggtgccgcaggtcggcgctatgtacaagggtgaccgctcgcgcaaggaaaccctg
gtggagtacggcttccgtctgccatcggcgctggacaaccggccgatgcgattcgatgaa
tgggaggcgatctgcccgcagaccatcttcgtttccgcgacgcccggcccttacgaggcc
gagcatgctggccgcgtggtcgagcaggtggtgcgcccgacgggtctggtcgatccacag
attgaagtgcgtccggcactgacgcaggtcgacgacctgctgtcggagatccgcaagtgc
gtggtcaaggaagagcgagtgctggtcaccacgctgaccaagcgcatggccgaggacctc
actgactatctgagcgaccatgacgtgcgcgtgcgctacctgcattcggacatcgatacc
gtggagcgggtcgagatcatccgcgacctgcggctgggcactttcgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggacatgcccgaggtgtcgctggtggcgatcctcgat
gcggacaaggaaggcttcctgcgttcagagcgctcgctgatccagaccatcggccgcgcg
gcgcgcaacctcaatggccgcgcgattttgtatgccgacaacatcaccgggtccatgcag
cgcgccatggatgaaaccgagcggcggcgtaataagcagattgccttcaacgaagctaac
ggcatcgtgccgcagggtgtgaagaaggacgtgcgggacattctcgaaggcgccacagtg
ccgggctcgcgtagcaagaagcggcgtggagaggcgaaggcggcggaggagagtgcgcgt
tacgagaacgaactgcgttcaccgagcgagatcaccaaacggattcgtcagctggaagag
aagatgctgagtctggcgcgcgatctggagttcgaggcggctgccgaggcgcgcgacgaa
atccacaagctgcgcgaacgcctgctgcaggtctga
DBGET
integrated database retrieval system
