Pantoea stewartii subsp. stewartii: DSJ_16480
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Entry
DSJ_16480 CDS
T04970
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_16480
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
DSJ_16480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
zinc_ribbon_2
UPF0547
zf-tcix
AAA_22
AAA_16
MciZ
Motif
Other DBs
NCBI-ProteinID:
ARF51961
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Position
3350630..3352384
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATVAHFRRHHEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLSLFDSAFSLVIVDECH
RIGDDKESQYQQIFTHLRQHNPNLRLLGLTATPFRLGKGWIYRFHYHGMVRGDEKALFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQANGLFSEADLNRELKQQQRITPQ
IIRQIVEFADDRQGVMIFASTVEHAREILSLLPENSALVSAETHAKDRDALIAAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKKDCLILDYAGNPH
DLFTPEVGTPKGKSDNEPVQVFCPACGFANTFWGKATSDGMVIEHFGRRCQGVLEDDEGE
REQCDYRFRFKNCPECNAENDIAARRCRECDKILVDPDDMLKAALKLKDARVLRCGGMTL
EQGRDEKGEWLNATYFDEDGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGRFWQIREKLFDYQGRFRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttactttacgtccctatcaacaggaagcggtggatgccaccgtcgcccacttc
cgtcgtcatcatgaacctgcagtgatagtgctgcccaccggggcaggaaaaagcctggtg
atcgcggaactggcacgcctggcccgcggccgggtgctggtgctggcgcatgtcaaagag
ctggtggcgcaaaatcacagcaaatatcaggcttacggcctggaggctgatatctttgcg
gcaggcttacagcgtaaagagagtcagcgaaaagtcgtgtttggcagcgtgcagtccgtt
gcgcgaaacctcagcctgtttgacagcgccttttcgctggtgatcgtggatgagtgtcac
cgcattggtgacgacaaagagagccagtatcaacagatttttacgcatctgcgtcagcac
aatcccaacctgcgtttactgggcttaacggccacaccgttccgtctgggcaagggctgg
atctaccgttttcattatcacggaatggtgcgtggcgacgaaaaagccctgttccgcgac
tgcatctatgaactgcccctgcgctatatgattaagcaccagtttctggtgccccctgaa
cggctggatatgccggtcgtgcagtatgatttcagccgcctgaccgcgcaggcgaatggc
ctgtttagcgaagccgatctgaaccgggaacttaaacagcagcagcgtattaccccacag
atcattcgtcagattgtggaatttgccgacgatcgccagggcgtgatgatttttgcttcc
acggtcgaacacgcacgggaaattctgagcctgctgccggaaaacagcgcgctggtctcg
gcggaaacccatgccaaagaccgcgatgccctgatcgccgcctttaaagcccagcagctt
aaatttctggtgaacgtcgccgtgttaacgaccggcttcgatgcgccgcatgtggacctg
attgccatcctgcgacccacggaatcggtcagcctgtatcaacagattgtcgggcgtggt
ctgcgcttgtctcccggcaagaaggactgcctgattctggactatgccggtaatccccac
gatttgtttacgcctgaagtggggacgccaaaagggaaaagcgacaatgagcccgtgcag
gtgttttgccctgcctgcggtttcgccaacaccttctggggcaaagccacaagcgatggc
atggtgattgagcacttcggccggcgatgccagggcgttttagaggacgacgagggcgag
cgtgaacagtgcgactaccgtttccgctttaaaaactgcccggagtgcaacgcagagaac
gacattgccgcgcgtcgctgccgcgaatgcgacaagattctggtcgatcctgacgatatg
ctcaaagccgccctgaaactgaaagatgcccgggttctgcgctgcggtggcatgactctg
gaacagggccgcgatgaaaaaggcgaatggctcaacgccacctactttgatgaagacggc
accagcgtcagcgagcgctttcgcctgcaaacccctgcacaacgcaaagccttcgaacag
ctctttatgcgcccgcaccagcgcgcacccggcgtgccgctgggctggcaaaccgccgcc
gatgtgctggccttacagccgctgctgcgtcatcccgattttgttgtggcgcgcgccaaa
ggccgcttctggcagattcgcgagaagctgtttgactatcagggccgtttccgccgggcc
aatgaactccgctag
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