Pedobacter steynii: BFS30_00090
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Entry
BFS30_00090 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_00090
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
GerE
Sigma70_ECF
HTH_40
HTH_24
HTH_28
HTH_17
HTH_Mga
HTH_10
HTH_3
Xre-like-HTH
Fe_dep_repress
HTH_7
MerR
Motif
Other DBs
NCBI-ProteinID:
AOM75710
UniProt:
A0A1D7QAK7
LinkDB
All DBs
Position
24170..24826
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AA seq
218 aa
AA seq
DB search
MKLVKPDLSALWTKICVEDDLKSFEVLYRSLAARLLKFSVYYVSQKEVAEEIVSEIFVKC
WENRKDNLHVLNPETYLFVAVKNQSLKHIRKYSNVHLVEIEEQPQSFQFRDSTDPSKELE
RKELHLKLDQAIDTLPAQAKMVFKLIKEDGMKYKEVAEILDISPRTVQTQLFRAIAKLRI
VLSSYYELDHKKNNSSNMANLILILGIMHYFLVFCRQF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcgtaaagcctgacttatctgctctgtggaccaagatttgcgtcgaagatgat
ttaaaatctttcgaggttttataccgttcccttgctgccaggcttttgaagttctccgtt
tattacgtctcgcaaaaagaggttgcagaagaaattgtttctgaaatatttgtaaagtgc
tgggaaaacagaaaggacaacctgcatgtccttaatccggaaacctatctttttgtggcg
gtaaaaaaccagtctttaaaacacatccgtaaatacagcaatgtgcacctggtagagatt
gaagagcagccgcaaagctttcaattccgggatagcacggatccctccaaagaactggag
agaaaagagctgcatcttaaactggaccaggcaatagataccctccctgcccaggcaaaa
atggttttcaagctaattaaggaggatggaatgaagtataaagaggtggcagagatttta
gacatctctccacgcacggtacagacgcaattgttccgggcaattgcaaaactcagaatt
gtgctcagctcctactatgagctggaccataaaaaaaataatagcagcaatatggccaat
ctgatcctgattttggggataatgcattattttttagtcttttgtaggcaattttag
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