Pedobacter steynii: BFS30_03940
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Entry
BFS30_03940 CDS
T04469
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_03940
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
Sigma70_r2
HTH_40
HTH_23
HTH_24
HTH_5
HTH_10
HTH_11
DNA_pol3_delta_C
PCI
HTH_36
CENP-B_N
HTH_28
Terminase_5
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AOM76379
UniProt:
A0A1D7QCV4
LinkDB
All DBs
Position
complement(983408..983971)
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AA seq
187 aa
AA seq
DB search
MNRYRSFTDPELTGLLENGDHTAFTEIYNRYWKKLFLVAAHKIKDLEEAEEIVQHIFVSL
WNRRDSLKITSSLSAYLSVSVKYRVIKSLDKQYHQQKYTASLGMKGITDDSTQEWLDFLE
LKERLEKLVCTLPEKCRIVYRMSREEGLSQKKIAEELEISEKTVEAHLGKAIKTLRAGLN
QFMTTLL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaataggtatcgcagttttactgatccggaattaaccggcttgcttgagaacggggat
cataccgcctttactgagatctataaccggtattggaaaaaattgttcctcgttgcggca
cataaaataaaggacctggaagaggcagaagaaattgtacagcatatcttcgtttctctc
tggaacagaagggatagcttaaagattacttccagcctttctgcctacctgtctgtttct
gtaaaataccgggtcatcaagtccctggataaacaataccaccagcaaaaatatactgcc
agtttgggtatgaaaggaattacagacgattccactcaggagtggcttgactttttagaa
ctcaaggaacgtttagagaaacttgtttgtactttacctgaaaaatgccgcatcgtatac
cggatgagcagggaggaaggtttatcccagaaaaaaatagccgaggagctggaaatatct
gaaaagaccgttgaagcccacctaggaaaagccattaaaactttgcgtgcagggctaaat
caatttatgacaaccttattgtaa
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