KEGG   Pedobacter steynii: BFS30_03990
Entry
BFS30_03990       CDS       T04469                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_03990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_03990
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_03990
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_11 HTH_24 HTH_23 HTH_38 HTH_DeoR MarR HTH_Tnp_ISL3 HTH_28 PCI HTH_Mga HTH_10 HTH_5 HTH_7 HTH_40
Other DBs
NCBI-ProteinID: AOM76387
UniProt: A0A1D7QCL7
LinkDB
Position
998372..998962
AA seq 196 aa
MHLKKQQRQSDDELLKAIQNDDRSAFESLYYKYWQKLYLSAYHILKDIHAAEDIIQEIFA
QLWLKRDQVSIDNLAAYLHTAVRFQVFKAIRDGKARIDLSSQAEEFFDKNSIEDSLHEKE
LDKRLEESIATLPEKCKEIFILSRKEHLSVKEIAIRLNISPKTVENQITIALRKLRTHMG
DLLFWALILLRVIIRH
NT seq 591 nt   +upstreamnt  +downstreamnt
atgcacctaaagaaacaacaacgccaatctgatgatgagcttctgaaagcaattcaaaac
gatgatcgttctgctttcgagagtctctactataaatactggcagaagctctacctttct
gcctaccatattctcaaggatatccatgctgcggaggatatcattcaggaaatctttgca
caattgtggttaaaacgagatcaggtttccattgataatttagccgcttatctacatact
gcagtccgttttcaagtgtttaaagccatccgtgacggtaaagccaggatagatttatca
agtcaggccgaagaatttttcgacaaaaacagtatagaagattcccttcatgaaaaagag
ctggataagcgtttagaagaaagcattgcaaccttaccggagaaatgcaaggaaattttt
atcctgagccgtaaggagcacctaagtgttaaagaaattgcaatacgccttaacatctct
ccgaaaaccgtagaaaatcaaatcaccattgcattaagaaagcttcgcacccatatgggt
gatcttttattctgggcactaatcttactccgggtgatcataagacattag

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