Pseudomonas sp. VLB120: PVLB_12260
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Entry
PVLB_12260 CDS
T02897
Name
(GenBank) outer membrane porin
Organism
psv
Pseudomonas sp. VLB120
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AGZ35240
UniProt:
A0AA86DU21
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Position
2707574..2708824
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AA seq
416 aa
AA seq
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MNHTPCVALGLTLLSQPLLAADGGFFEDAKATLSARNYYFSRDFSDIVGANQQSKAEEWA
QGFILDFKSGYTPGTVGFGVDALGLLGIKLDSSPDRVNTGLLPVQGDGRAADEYSRLAPT
FKARLSKTELRVGELQPNLPVLTFSDIRLLPPTYQGMSLSSAELDGLTVQAGHLSSSHLR
NEAGDGKMNAMLGHVPQRQAQSDAFNYAGGDYAFNANQSSVSLWYGQLQDIYEQGFVGLK
HSKPLGDWVLSANLGYFTAHEDGDALLGNIDNQAFFSLFTARRGGHSFHVGYQGIYGDSP
FPRVFANVSPLGNEVPTYEFASTDERSYQVRYDYNFAAMGIPGLTATVRYITGDNVDTGR
DYEGRDRERDLDLGYAVQSGVFKGLGIRLRNAMARSNYRSDIDENRVTLVYTWQLF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaccccttgcgtcgccctggggctgaccttgctcagccaaccgcttcttgcc
gccgacggcggtttcttcgaggatgccaaggccacccttagcgcccgcaactactatttc
agtcgtgacttttccgacattgtcggtgccaaccagcaatcgaaagctgaggagtgggcc
cagggcttcattcttgatttcaagtcaggttacacgccgggtacagttggtttcggggtg
gatgccctgggcctgctgggcatcaagctcgacagcagcccggaccgggtcaataccggg
ttgctgccggtacagggtgatggccgggctgccgatgagtacagccgcctggcgccaacc
ttcaaggccaggctgtcgaagaccgaactgcgggttggcgaactgcagcccaacctgccc
gtgttgaccttcagtgatatccgcttgttaccgccaacctaccaaggtatgagcctgagt
tcggccgagctcgatggcttgaccgtgcaagcagggcacctgagctcgagtcacctgcgc
aacgaagccggtgatggcaagatgaacgccatgctcggccatgtgccgcagcgccaggct
caaagcgacgccttcaactacgcgggcggtgactatgcgttcaacgccaatcaaagcagc
gttagtctgtggtatggccaactccaggacatctacgagcagggtttcgttggcctcaag
cacagcaagccgctgggcgattgggtgctcagtgccaacctgggctacttcacggcccac
gaagatggcgacgcactgctgggcaacatcgacaaccaggcgtttttctcgctgttcacg
gcccggcgtggcggacacagcttccatgtgggctaccaggggatctatggtgacagcccg
ttcccacgggtattcgccaatgtgtcgcccttgggcaacgaggtgccgacctatgagttc
gcctccaccgatgagcggtcctatcaggtgcgctacgactacaatttcgcggccatgggc
attcctggactgaccgcgaccgtacgctacatcaccggcgacaacgtcgacacaggccgt
gactacgaggggagggaccgcgagcgcgatctagaccttggctacgccgtgcagagtggc
gtgttcaaggggctgggcattcgcctgcgcaacgccatggcgcgttcgaactatcgcagc
gatatcgatgagaatcgtgtgacgctggtgtacacctggcagttgttctga
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