Pseudomonas sp. VLB120: PVLB_13190
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Entry
PVLB_13190 CDS
T02897
Name
(GenBank) IPT/TIG domain/outer membrane autotransporter barrel domain-containing protein
Organism
psv
Pseudomonas sp. VLB120
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
TIG
SprB
Motif
Other DBs
NCBI-ProteinID:
AGZ35424
UniProt:
A0AA86AF28
LinkDB
All DBs
Position
2917119..2921798
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AA seq
1559 aa
AA seq
DB search
MHSLAYHRAWLTRSFLLLWLSALALMMPAQAMAMTFSPAPGSNLGSFPAGQSLSIPLSVS
GGVLPMTGWYECDVSVTYDPSLKCLPTGLTIAESTNSESTTINGTPNVAPGVYSFTLTVF
DSFTPATVNYSITITGGPTVTSLSPTSGSTSGGTSVTISGTGFTGATGVAFGGNAATFSV
NSDTSITATTPSGSAGTVPVVVTTAAGSSVINGNSQYTYVAPPIAGAVSATVAANSSSNP
IPLNLSGGAATSVAVASQASHGTATASGTSITYTPTAGYSGPDSITYTASNAIGTSAPAT
ISFTVSPPTLALSPATLPSGTAGTAYSSTLSASNGSAPYSFSLTSGALPPGLNLSGNTLG
GTPSASGTFNFTVTATDSFGATGSQPYALSIAAPTLSLTPTSLSDASAGVPYTSTFNTTG
GTAPYSYAIIAGSLPAGLALIGNALSGTATVSGTFTFTVTATDANSFTTSRSYTLTVASP
TITVSPVSLSGGIAGAAYSATLGASGGTAPYTFAVTAGALPSGMTLSGDTLSGTPTADGT
FNFTVTATDGNNFTGSRAYSLTIVQQPPVAGTVNLSVAANSTTNAVTLNLGGGPVSSVAV
VSAASHGTATASGTSITYTPNAGYSGADSFTYTATGPGGTSAPGSVNISVGAPTLVITPG
TFGGGIVGSAYSTPLSSVGGTAPYSYSVTAGSLPTGLVLSPAGVLGGTPTNSGSFNLTIT
ATDAYGATGSQAYTLLIADQAPVAGAVSTTVAANSSTHAIPLALSGGPVSSVAISTAPSH
GTAVVSGTAISYTPTAGFSGSDSFAYTATGPGGTSAPATVSLSVTAPTLALNLANLVDGT
LGTAYSASLGASGGTAPYTYAISTGSLPAGLSLSPAGVLSGTPTSNGSFALTFTVSDAYG
AVGSQAHTLVIADRAPIAGNSSATVAANSSANAISLALSGGAATSVTVTSAPAHGSAIAS
GLGIRYTPSAGYSGSDSFAYTANGPGGTSAPATVTVSVSAPTLDVEPSAGSVEGGTLGSA
YRMSLRALGGMAPYRFTLSAGSLPTGLVLDSGSGVISGTPQSTGTHTLEVTVTDVNGAVG
TFSFALSIAAQTVTVVSSNEALVPGQVASVDLTQGATGGPFLRARLLSLSPASAGSASLS
GPFTLRFAPTTVFAGTAVATFSLENGNGGSATGTVTFTVQARPDPGQDAEVIGVLNAQSR
AAERFASTQMDNFNRRLEQLHRPTCDRNAFNASVKHGREDVRLGDLGKALRDELQGNDAE
SDEQRRKQRDSARTIDGECREAPLAFWTDGFINTGSNRARGAKDNSYTTYGLSAGVDYRL
SPRTVVGMGVGYGTDRTDVGDHDTHSEGDALGLAAYLSTHPLSEVYVDALLGYNRIRFDS
RRYVTSDPSNGYAHGSRDADQWYASLTASYEYRAGALSLAPYARVNGSVTTLDDYRERGG
GIYGLSYDEQHQRTFTSFLGLRGAYDIQTRAGVLTPRVGLAWGHNFSHSDDYRMRYTDQG
DDGVLYRLSPDPMDSNFIDLDTGLELSLGRSWRLGLSYKTALGSDERNEMFRIGLDGRF
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgcactcactcgcgtaccaccgtgcctggctgaccaggtcgttccttctgctgtggctg
tcggcgctcgccctgatgatgccagcccaggccatggcgatgacgttcagccctgcccca
ggcagcaacctgggcagtttccccgcaggtcagagcctgagtatcccgctgagcgtctca
ggcggcgtcctgccgatgaccggctggtacgagtgcgatgtcagcgtgacctacgacccc
tcattgaagtgcttgccaacaggcctgaccatcgccgagtccacgaacagtgagtcgact
accatcaatggcaccccaaacgtcgcgcccggcgtttacagcttcaccctgacggtgttc
gacagcttcactcccgcgaccgtgaactactcgatcaccatcaccggcggccccacggtg
accagcttgagccccacctcgggcagcaccagcgggggcaccagcgtgaccatcagcggc
actggtttcaccggcgccacaggggtggcatttggcggcaacgcagcgacattctcggtc
aacagcgacacctcgatcaccgcgaccacccccagtggatcagcgggtaccgtgccggtg
gtggtcaccacggcagcgggctcctccgtgatcaatggcaatagccagtacacctacgtc
gcaccgcccattgccggtgcggtgagcgcaactgtggcagccaacagcagtagcaacccc
atccccctgaaccttagcggcggcgcggccaccagcgtggcggtggccagtcaggccagc
catggtacggcgaccgccagcggtaccagcatcacctatacgcccacagcaggctactca
ggcccagacagcatcacctataccgctagcaacgccattggcacctccgcaccggcaacc
atcagtttcacggtttcgccgcccaccttggcactaagccctgcgaccttgcccagcgga
accgctggcaccgcctatagcagcacgttgagcgccagcaacggctcggcgccttatagc
ttcagccttaccagcggcgcgcttccccccggactgaacctcagcggcaacacgctgggt
ggaacgccgtccgccagcggtaccttcaacttcaccgtcaccgcaaccgacagtttcggt
gccacagggtcgcaaccttacgccctgtccatcgcagcgccgacgctcagcctcacgccg
acctccctgagcgatgccagcgcaggagttccttacaccagcaccttcaacaccacgggc
ggtacggcaccctacagttatgccatcatcgcgggcagccttccggctggattggccctg
atcgggaatgcgctgagcggtacggccaccgtcagcggcaccttcaccttcaccgtcacg
gcaaccgacgccaacagcttcaccacctcgcgcagctacaccttgaccgtggcgtcaccg
accatcaccgtctcaccggtctccctgagcggtggcatcgctggcgcggcctacagcgct
accctcggtgccagcggcgggactgcgccctacacctttgccgtgacggcgggtgctctg
ccaagtggcatgaccctcagtggcgacaccctgagcggtacgcctaccgccgatggcacc
ttcaatttcaccgtcaccgcaaccgacggcaataacttcactggttcgcgggcctacagc
ctgaccattgtccagcagccccccgtggcgggcaccgtcaacctgtcggtggcggccaat
agcaccaccaacgcagtcacactcaacctcggtgggggccctgtcagcagtgttgccgtg
gtcagcgcggccagccatggcacggcaaccgccagcggcaccagcatcacctacaccccg
aatgccggttactccggggccgacagcttcacctacaccgccaccggcccgggcggtacc
tcggcaccgggctccgtcaatatcagcgtgggcgccccaaccctggtcatcacccctggt
accttcggcggtggcatcgtcggctcggcgtacagcaccccactcagcagcgtgggcggc
accgcaccctacagttacagcgtcactgccggcagcctgcccaccggcctcgtcctgtcc
ccggccggcgtactcggcggcacaccgaccaacagcggcagcttcaacctgaccatcacc
gccaccgacgcctacggtgccaccggcagccaggcgtacaccttgctaatcgctgaccag
gcgccggtggccggtgcggtcagcactacggtcgctgccaacagttcgacccatgccatc
cccctcgctttgagcggcggtccggtcagcagcgtggcgatcagcaccgcccccagccac
ggcaccgcagtggtcagcggcacggcgatcagctatacccccacggcaggtttctcaggc
agcgacagctttgcctataccgccaccggccccggcggcacttcggcgcccgccacggtc
agcctgagcgtgaccgcaccgaccctggcgctgaatctcgccaacctggtcgatggcacc
ctgggcactgcgtacagcgccagcctgggtgcttcagggggcaccgcgccttacacctat
gcgatcagcacaggcagcctgccagccggtctgagcctgtcaccggccggcgtgctcagc
ggcacgccgaccagcaatggcagcttcgccctcaccttcacagtaagcgacgcctatggc
gcggtcggtagccaggctcatacgctggtgatcgccgaccgcgcccccatagctggcaac
agcagcgccacggttgctgccaacagttcagccaacgccatcagcctcgccctcagcggc
ggcgccgcgaccagcgtgaccgtgaccagcgctcccgcacatggcagcgccatcgccagt
ggcctgggtattcgctacacccccagcgccgggtactccggcagcgacagctttgcctat
acggccaacggccctggcggtacttcggcaccggcgacggtgacagtgtccgtcagcgca
ccgaccctggatgtcgagcccagcgctggcagtgtcgaaggcggcaccttgggcagtgcc
tatcgcatgagcttgcgcgccctcggtggcatggcgccgtaccgcttcaccctgagtgcg
ggcagcctgccgacaggcttggtcctggacagcggcagtggggtgatcagcggcacgccc
cagagcacaggcacccacacccttgaggtgactgtcaccgacgtcaacggcgcggtcggt
accttcagcttcgccctgagcatcgcggcccagacggtcaccgtggtgtcgtccaacgaa
gccctggtacctggccaggtggcgagcgtcgacctgacccagggtgccaccggtggcccg
ttcctgcgcgcgcggctgttatcgctcagtccggcatcagccggtagcgcaagcctgagc
ggcccgttcaccctgcgcttcgcaccgaccacggtgtttgccggcactgccgtagccacc
ttcagcctggaaaatggcaacggcggcagtgcaaccggcaccgtgaccttcaccgtgcag
gcccgcccagaccccggccaggatgccgaagtgatcggcgtgctcaacgcccaatcacgc
gccgctgaacgtttcgccagcacccagatggacaacttcaaccgccgcctggaacaactg
caccggccaacctgtgaccgcaacgcgtttaacgccagcgtcaagcatgggcgcgaagat
gtgcgccttggcgatctgggcaaggcgctgcgcgatgaactgcaaggcaacgacgcggag
tcggatgagcaacgacgcaagcaacgggacagcgcgcggacaatcgatggtgaatgccgt
gaggcgccgctggccttctggaccgatggattcatcaacaccggctccaatcgcgcccgt
ggcgccaaagacaatagctacaccacctatggcttgagcgccggcgtggactatcgtctt
tcaccacggaccgtggtgggcatgggggtcggttacggcaccgaccgcaccgatgtcggc
gaccatgacacccacagtgaaggtgatgcgctgggcctggcggcctacctgagcacccat
ccgctgtcggaggtgtatgtggacgcgctgcttggctacaaccgcatccgcttcgactcg
cgccgctacgtcacgtccgacccgtcgaacggctacgcccacggctcgcgggatgccgac
cagtggtacgcgtcgctgaccgccagctacgagtaccgtgccggcgcgctttcactggcc
ccgtatgcacgggtcaacggcagcgtcaccacgctggacgactaccgcgagcgtggcggt
ggcatctatggcctgagctacgacgagcagcatcaacgcaccttcacctcgttcctcggc
ctgcgcggtgcctacgacatccagacccgcgctggcgtgctcacgccgcgagtggggctg
gcctggggccacaacttcagccatagcgacgactaccgcatgcgctacaccgaccagggt
gacgacggtgtgctgtatcggctgtcacccgacccgatggacagcaacttcatcgacctg
gacactgggcttgagttgagccttgggcgcagttggcgtctgggcctgtcctacaagacg
gccctaggtagcgacgagcgcaacgagatgttccgaatcgggctggacggacgcttctga
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