Pseudomonas sp. VLB120: PVLB_23310
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Entry
PVLB_23310 CDS
T02897
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_23310
Transporters [BR:
psv02000
]
Other transporters
Pores ion channels [TC:
1
]
PVLB_23310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AGZ37441
UniProt:
A0AA86AHB5
LinkDB
All DBs
Position
complement(5130265..5131548)
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AA seq
427 aa
AA seq
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MSLPLRIVLACSLCSGLSLCFLPLPCALAGTASLMTQPTLTGNWGGQRQKLEEQGIKLTG
DYTSETLSSLNGGIKRGTRYAQQIRLGAQFDLSKLLDIPNAGRVQVLVNDRRGHSATEDL
IGNRMSAQEIYGGEYTRLTELSYQRNLFSPDLSAKVGYMVMGTEFGGMPILANFVSAGFC
AHPLTMSSGSGWGNYPTAHWGGELRYDVNPSLTLQTALFQVNPEYNARVSKAFAMPANGT
TGAIMPLEAIINNGAFLNGQYKVGWYYDTSDYPKIGGTGKSSSRTGAYLLVDQAIWRDEQ
DPASALRLFGQAATSNAATSPMRRWYSVGLVRQKPFDSRPQDSISFGYGRAVINPRTRDV
QEAGAEQYSMISGLDSGEQVLELNYGAQVTPWLLLRPDVQYYIEPGAFFGKQRGNALAVG
LQIKMTL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacccctccgcatcgtgctggcctgcagcctgtgcagcggcttgtccctgtgt
ttcctgcccctgccttgcgcactggcaggcactgccagcctgatgacgcaacctacgctc
actggcaactggggcggacagcgccagaagctggaggagcaaggtataaagctgacgggt
gactacacctcggaaaccctttccagcctgaatggcggcatcaagcgcggcacccgctat
gcacaacagatacgtctgggcgcgcagtttgacttgagcaaactgctcgacattccaaat
gccggtcgtgtgcaagtgctggtcaatgatcgtcgcggccacagtgccaccgaggacctg
attggcaaccgcatgtccgcgcaagaaatctatgggggcgagtacacccggctgacggag
ttgagttaccagcgcaatctgttctcccccgacttgtccgccaaggttggctacatggtc
atgggcaccgagttcggtggcatgccgatcctggccaactttgtcagcgccggcttttgt
gcacacccgctgaccatgtccagcggcagtggctggggtaactacccgacagcccactgg
ggtggcgagttgcggtatgacgtcaacccgtcgctgacgctgcaaacggcgttgttccaa
gtcaacccggagtacaacgcgcgcgtatccaaagccttcgccatgcccgccaatggcacg
acgggcgccatcatgccactggaggcgatcatcaataacggcgccttcctcaacggccag
tacaaagtgggctggtactacgatacatccgattaccccaagattggcggcaccggtaaa
agcagcagtcgtacaggcgcttacttgctggtcgaccaggcgatctggcgcgatgagcaa
gacccagcgagtgccctacggttgttcgggcaagctgccaccagtaacgctgcgacctca
cccatgcgtcgctggtactccgtgggcctggttaggcaaaagccgtttgacagccgcccg
caagactccatttcctttggctatggccgcgccgtgattaacccgcgcacccgcgatgtg
caggaagccggtgcagagcaatattccatgatcagtggtctggatagcggcgagcaagtg
ctggagctgaactacggtgcgcaagtgaccccttggctactgctgcgccccgacgtgcag
tactacatcgagcctggtgcattctttggtaaacaaagaggaaacgcgctggcggttggg
ttgcaaataaaaatgacgctttag
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