Pseudomonas cremoricolorata: LK03_06110
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Entry
LK03_06110 CDS
T03354
Name
(GenBank) helicase
KO
K19789
DNA repair protein RadD
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_06110
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LK03_06110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIR88863
UniProt:
A0A089YAL0
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Position
complement(1416954..1418807)
Genome browser
AA seq
617 aa
AA seq
DB search
MNYFTETAANILGNNKLRTPQIEAYIKAQDHFASSDEDALIVLPTGTGKSGLISIVPYGL
AKGRVLIVTPNLVTKQSIRKTQELLEDNFWINQDIIFSADDLPVICEYNSKTLSSSLELS
HFVYSNIQQVHSERDGCLTRRVSPDFFDLIIIDEGHHAPADTWQRTLGYFAKAKKIFITG
TPFRGDKQEVPGRLIHETPLSEVMRDRYVKWLRKQTVNAHELYFTLAEQPGVRLSKDEVL
ALKDKEWLERSVALSPECSMDVIEQSIANLSELRKVSPNVPHKILAVGCSITHAVDLQAW
YQSKSLTAAIVHSNMEQSDLDAAFRAIDNHECDVVISVNMLMEGYDHRYLTVLALFRPYR
SINAFAQIVGRVLRAIPAEEITAFEVDNNAVVIYHEETGLDSMWSAFQKEVDRAQHQRTR
EYTITDIEYTRKEQSLAGVTSSDAFVSDQDSYLDDLDFNKIFSEKRAEIDSIATQKLQEM
SALAGYDEATLAQFKSLIINAETRKAAQTIDPNLVAKRPEIARRQMREILTKKAQDEVAT
LLSDLGIDAKASTLYPKFSRHLVGIQSTMPNDGILVRSINAKLVKKFGKVAERDTNALSR
SIEHVEVIMAELRGMLK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaattacttcaccgaaacggcagccaatattcttggcaacaacaagctgcgtacgccc
caaatcgaggcatacatcaaagcgcaggaccatttcgctagctccgacgaagacgctttg
atcgttctcccgaccggcacaggaaaaagtgggctgatctccatcgtaccgtatgggctg
gctaagggccgtgtcctcatagtaacgcccaacctggtgactaagcagagcatccgcaaa
acccaagagcttctggaagacaatttctggatcaatcaggacattattttcagtgctgat
gaccttccagtcatctgcgagtacaactccaagactctctcctctagcttggagctgagc
cacttcgtctactcgaacattcagcaggtccacagcgagcgagacgggtgcttaaccagg
cgtgtgtcgcctgacttcttcgatctcatcatcatcgatgagggccaccacgccccggcc
gacacgtggcagagaacccttggatatttcgctaaggccaaaaagattttcatcactggc
actcctttccgtggtgacaaacaagaggttcctggaaggctcatccatgaaacgcctctg
tcggaagtcatgcgagatcggtacgtcaagtggttgaggaaacagaccgtcaacgctcac
gaactgtacttcactctggcagagcaaccgggtgttcgtttgtctaaggatgaggttctt
gccctcaaggacaaggagtggctagaacgaagcgtcgcgctttcgcctgaatgctcgatg
gatgtgatcgagcagagcattgccaatctcagcgagctacgtaaggtgtcgccgaacgtg
ccgcacaagatcctcgccgttgggtgcagcattacccatgccgtagatctccaggcttgg
taccaatccaagagcctcactgcggctatcgtgcatagcaatatggagcagtcggatctc
gatgccgcattccgggcgatcgacaaccacgagtgcgacgttgtcatctccgtaaacatg
ctcatggagggctacgaccaccgttacctcacagtgctcgccctgttccggccttaccgc
agcatcaacgcctttgcgcagatcgtcggccgtgtactgcgtgcgatcccggctgaagaa
atcaccgcatttgaggtcgacaacaatgcggtggtgatttaccacgaggaaactggcctt
gattcgatgtggagtgctttccagaaggaagtggaccgcgcccagcatcagcggacgcgc
gagtacaccatcactgacatagagtacacgcgaaaagaacagtccttggcgggtgtcact
tcatctgatgcgtttgtgagcgatcaagattcctaccttgatgacctcgatttcaacaag
atcttttctgaaaaacgggctgaaatcgactccatcgcgacccagaagctacaggagatg
tcagctctcgcgggttacgatgaagccaccttggctcagttcaagagcctcatcatcaac
gctgaaacccggaaggctgctcagacgattgaccctaatctcgtggcaaagcggccggag
atcgcccgcaggcagatgcgcgagatactcaccaagaaggcgcaagatgaggtggcgacc
ctactgagcgacttaggaatcgacgcaaaagcgtctaccctttatccgaaattcagtcgt
cacttggtgggaattcaatccacaatgcctaacgacggtatactggtgagatctattaac
gccaagctcgtgaagaaattcggtaaggtcgctgaacgggacaccaatgcgctgtccagg
tccatcgagcatgtcgaggtgatcatggctgaactgaggggtatgctgaaatga
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