Pseudoliparis swirei (Mariana hadal snailfish): 130188136
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Entry
130188136 CDS
T09868
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130188136
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130188136
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
130188136
NCBI-ProteinID:
XP_056262244
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All DBs
Position
23:18577476..18627432
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AA seq
472 aa
AA seq
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MLMSTDVASIMMPVSRGIMERDIDTTAGALADDDGGLAAAAAVRGMKRGDPEPDAPPAAA
LTEAESKRPRTDGTGAVVVDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGLVAPPFSAF
PPPPPPQNGLPGTEFGPGAMFGAGGAADVGAGANGAASTTTVAISNNGKAEEVPQGEAGV
QCGTGGDGSVGDPSEAKGSPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGSK
GFGFVTFETSADAEKARDKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALSTLPY
AAGWKLSPMMGAMGAMYGPEIYADQLMTLLSRPSVPGFPYPSAAAVTTAAAFRGAHLRGR
GRPVYSAVRAAVPQPAMAAYPGVVYQDGFYGAAELYGGYPAAAAAAAAAAAYRYAQPATV
TGATAAAAAYSDSYGRVYTTDPYHALSPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccataatgatgcccgttagtcggggaataatggaa
agggacatcgatacgacagccggtgccctcgcggacgacgacgggggtctggcggcagct
gcagctgtccgtgggatgaagcgaggagacccggagcccgacgctccgccggccgctgcc
ctgaccgaggcggagagcaagagacccagaacagacgggaccggggctgtcgttgttgac
attggacagaacaatgagcctctaaaccccggtttccacggatacccacctcacagccag
ggctctcaggattcgacaggaggacaggaggggttggtggccccgcccttttcagcgttc
cccccgccgccccctcctcaaaacgggctgccagggacggagttcggccccggggccatg
ttcggtgccgggggagcagcagacgtcggggccggcgctaacggcgccgcctccacgacc
accgtcgccatcagcaacaacggaaaggcagaggaggtgccccagggcgaggcaggtgta
caatgtggcacggggggagacggctctgtgggagacccctcggaggccaaagggtccccc
aagcgtcttcacgtctcaaacatccccttccgcttccgggaccctgacctcaggcaaatg
tttgggcaatatgggaagattctggacgtagagataattttcaatgagaggggctccaag
ggttttggctttgtgacatttgagaccagcgcagacgcagagaaagccagggacaagctc
cacggcacgttggtggaaggccgtaagattgaggtgaataacgccaccgccagggtgatg
accaacaagaaaatggtcagcccctaccctaacggagaagctctcagcacgctgccttat
gcagcgggatggaaattgagtcctatgatgggggccatgggagccatgtacggacccgag
atctacgcagatcagctgatgactctcctttctcgtccttcagtccctgggttcccatac
ccctcggcggcggcggtcactacggcagcggcgttccgcggcgcccacctccggggccgg
ggccggcccgtgtacagcgccgtgcgggccgccgtgcctcagcccgccatggccgcctac
cccggtgtggtgtatcaggatgggttttacggagccgccgaattatatggaggctaccct
gctgctgctgctgctgctgccgctgccgccgcctaccgctacgcccagcccgccaccgta
accggagcaaccgccgcagctgccgcctacagtgacagttatggccgggtgtacaccaca
gacccgtaccacgccttgagtccagccgccgctgcctacggagtgggagccatggccagt
ctgtaccgggccggctacagccgcttcgccccgtactaa
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