Pseudoliparis swirei (Mariana hadal snailfish): 130188897
Help
Entry
130188897 CDS
T09868
Symbol
ddx47
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130188897 (ddx47)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130188897 (ddx47)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
90S particles
Helicases
130188897 (ddx47)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
SWI2_SNF2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
130188897
NCBI-ProteinID:
XP_056263426
LinkDB
All DBs
Position
23:complement(19088792..19094529)
Genome browser
AA seq
483 aa
AA seq
DB search
MADDVVESVKPNTDETVQTSSSGDVDGDDIKAVVKTFKDLGVTEVLCEACEQLGWKTPTK
IQLEAIPLALEGKDIIGLAETGSGKTGAFALPILQSLLRSPQRLHTLVLTPTRELAFQIA
EQFEALGSSIGIKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRALK
FLVMDEADRILNMDFETEVDKILKVIPRERRTYLFSATMTKKVQKLQRAALKDPVKCMVS
TKYSTVEKLQQYYIFIPTKYKDCYLVSIINELAGNSFMIFCSTCNNAQRVALLLRNLGIT
AIPLHGQMSQNKRLGSLNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIH
RVGRTARAGRSGKSITFVTQYDVELFQRIESLIGKKLPAFPTQEDEVMMLVERVSEAQRF
ARMEMKEEGEKKKRPRGGGDGDQDDTEQASGVRKKVRGGGGGGGGGGGEEVVVEEEEVEV
VVG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgttgtggaaagcgtgaagccaaacacggatgaaacagtccagacttcg
agtagcggcgatgttgacggcgacgacatcaaggcggtcgtgaagaccttcaaggacttg
ggtgtcaccgaggtcctctgtgaggcctgtgaacagctgggatggaagactcccacaaag
atccagttggaagccatacctttagccctggaagggaaagacatcattggcctggcagag
accggttctggaaagacgggagccttcgctctgcccatcctgcagtcactgctgcgctcg
ccccagaggctccacaccctcgtcctcacccccaccagggagctggcgtttcagatcgcc
gagcagtttgaggccctgggctccagcatcggcatcaagtgtgcggtcatcgttggagga
atcgacatgatgtcccagtcgttggtgctggctaaaaaacctcacattgttattgccaca
cctgggaggttgatcgaccacatggagaacacaaagggattctccctacgagcgctgaag
ttcctcgtcatggacgaagcggacagaatcctcaacatggactttgagactgaggtggat
aaaatcttgaaggtgattcccagagagcggcgcacctatctgttctccgccaccatgacc
aaaaaggtccaaaagctacagagagcagctctgaaagatcccgtgaagtgtatggtgtcc
accaaatactctaccgtagagaaactacagcagtattacatcttcatacccacgaagtac
aaggactgttacctggtgtccatcataaacgagctagccgggaactcgtttatgattttc
tgcagcacgtgcaacaatgcccagcgggtggcgctgttgttaaggaacctcggcatcacc
gccatccctcttcacggccagatgagtcagaacaaacgcctcggatcgctaaacaagttc
aagtccaagtctcgttcggtgctgctggcgacggacgtggcgtccagaggactggacatc
ccccacgtcgactgcgtcatcaactacgacatccccacccactcgaaggattacatccac
agagtcggacgaaccgccagagcagggcggtcggggaaatccatcacttttgtcactcaa
tatgacgtggagcttttccagcggatcgaaagcctgattgggaagaagcttccggccttc
cccacccaggaggatgaagtgatgatgttggtggagagggtgagcgaggcccagagattt
gccagaatggaaatgaaggaggaaggagagaaaaagaaaaggcccagaggaggaggagat
ggagaccaggatgacacggaacaagcaagcggtgtgaggaagaaagtgagaggaggagga
ggaggaggaggaggaggaggaggggaggaggtggtggtggaggaagaggaggtggaggtg
gtggtgggatga
DBGET
integrated database retrieval system
