Pseudoliparis swirei (Mariana hadal snailfish): 130193841
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Entry
130193841 CDS
T09868
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193841 (trappc8)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
130193841 (trappc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
PTN_MK_N
Motif
Other DBs
NCBI-GeneID:
130193841
NCBI-ProteinID:
XP_056270588
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All DBs
Position
5:complement(14937633..14959937)
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AA seq
1481 aa
AA seq
DB search
MAQCVQSVQEFVQDTFVPMVAVLCSEEAERVTRKNNLNFAELLRPFCRLTSDGHIRDPNN
QVQVVKNLRICVNNVVTSPNTAFSPAQRRVLNEVVLSCQPQEGAATNVITAVDCDLNFSD
HSLKASAPWYSAWKETLSEVSTSKHYTATTPWFEAYRETFLQSMPASEHEFLNNYLACLL
VVSSTETVPVEQFLKLSQEQHRIQHSGDYTNPKWFIPNTLKYYVLLHDMSEGEEQRADSV
YEDMKQRYGHQGCYLLKMNSRTFSAEEDEQIPDPWSQYLHRNHLQNQEVLDAAVENNISA
TEGDTHHSTEKDEPANSPESHPLQLDAASSSGSLHTLSDVNPELKKGARDPESLAGGAGS
HGACLTLNDHDHIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFTATKKWFGG
GKVPEKGISEPKSTFGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLSDQA
MLYAAGALEMAAVSAFLQAGAPRPYPAHYMDTAIQTYRDVCKNMVLAERCVLLSAEILKS
QVKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKFAFHMILAGHRFSKAG
QKRHALRCYCQAMQVYKERGWSLAEDHINFTIGRQSFTLGQLENAVTAFRQILTNDSRQT
ATQQGAFLREYLYVYKSVVGGNEDSLPQLPLPCIHSSATRVYFGHERRLAEGEKQAATHV
SLDQEYDQDLAVMWCHLEEQLVAAANRGIVPATFHPTQCCLNSQTDNLRFPLAVAEEPII
VEVMFRNPLKVPLALSNLSLLWRFTAEGATPSEEKTTDESAGEAVTNEETLTEGTTQKDD
VVTTEIILEFLLGPEETKVARLRLLPHRTGQLNIVGVVYNLAAASSGEPAPSAEGQQALE
LMVVRGRQDLKIQGPRLNQTKEDKMLVRYGQDRRLDPIITPPMPLMEIFFLQFPTALLCG
EIRKAYVEFCNISSVALCGLRVASTHPDFFTFGSQTTTPLTPVSPTSGENCSAYKTTATT
REPGSVASETLVSAKDFSQLSGVMEIPIEGSTLQPGESTLLPLWLRGPDQEGVHEINFLF
YYEGTKKGIKISHRVLRHSVFICASRSLSVQASACRSSVPPHHSVDDKGSGGTLVFVDVE
NINTSEAGVREFHIIQVSSSSKHWRLHKCINPANDKDCKLGSRERAKLCFRATRCKPHQA
TSAAVEKYTFADLNLGNERIISSSTPCGDFFFRGCRPSESKRVEVTSSRMSSSSKSPVSD
ISSIIRKCNELDLNIIVIWKAYVVEDNKQLILEGQLHVALQTIGKEASSLTPKEEAQEMV
LLKFKAEVPAPVAPPSAELSQLIKTNLHYPETYTHPFALESLCVVPVTLTLSNCSSAPVD
VLIDLRHKSSSPESLEVHSSFTWVGQTQYKLQLKPQEVLCLTLRACFLQAGVYNLNTPRV
FAKLAEQGAMCETSQQAASPALIIINSARVEPQGGVLGLLD
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgcgtacagtccgtgcaggagttcgtccaggacacgttcgtcccgatggtc
gccgtcttatgcagcgaagaggcggagagagtgactcgtaagaacaacctgaatttcgct
gagctgctgcggcctttctgcagactgacgtccgacggtcacatccgggaccccaataac
caggtgcaggttgtaaaaaacctgcgcatctgtgtgaacaatgttgtgacgagcccaaac
acggccttcagccccgcccagcggcgagtgctcaatgaagtggtgttatcctgccagcca
caagagggcgctgccaccaacgtgatcacggctgtagactgcgacctcaacttcagtgat
cactctcttaaagctagcgctccctggtacagtgcctggaaagaaacactgtctgaagtc
agcacctccaagcactacacagcgaccacgccctggtttgaagcctacagggagaccttc
ctgcagtcaatgcccgcctccgaacatgagttcctcaacaactacctcgcatgcctgctg
gtggtgtcctccaccgagacggtccctgtggagcagttcctcaagctctcccaggagcag
cacaggatccagcacagcggagattacaccaaccccaagtggttcatccccaacacgctc
aagtactacgtcttactgcacgacatgagcgagggggaagaacagagggccgattcagtg
tacgaggatatgaagcagaggtacggtcaccagggctgctacctgttgaaaatgaactct
cgtaccttctcggctgaagaagacgaacagattccagacccctggagtcagtacctgcac
aggaatcacctgcagaaccaggaggtgcttgatgctgctgtggagaacaacatcagtgca
actgaaggggacacgcatcactctacagagaaagacgaacccgccaacagcccggaaagc
catcctctccagttggacgcagcgagcagctcggggagtctgcacaccctcagtgatgtg
aaccctgagctgaagaaaggggcgagggatccggagagcctggcggggggagcagggagc
catggggcatgtctgaccctgaatgaccacgaccacatcagacagttcatccaagagttc
accttcagaggcctgctgccacacatagagaagaacatccggcaactcaacgaccagctg
gtctccaggaaaggtctgagccggtctttgttcaccgccaccaagaagtggtttggtgga
gggaaagttcctgagaagggcatcagtgaaccaaagagcacatttggccttctatatccc
ccagaagcccctgagctgcagatcaggaagatggccgacttgtgcttcctggtccagcac
tacgagctggcctacagctgctaccacacggccaagaaagacttcctgtcagaccaggcc
atgctgtatgcagcaggggcactggaaatggctgcagtgtcagcctttctgcaggctgga
gctcccagaccgtacccagctcactacatggacaccgccatacagacgtacagagatgtc
tgcaagaacatggtgctggctgagcgctgtgtgttactcagtgctgagatcctcaagagt
caggttaaatactcggacgctgcaactctcctcatcaagatgaccagcgaggactctgac
ctgcgcagtgctctgctgctggagcaggccgcccactgctttattaatatgcgcaatccc
atggtgcgcaagtttgccttccatatgatcctggccggtcatcgttttagcaaagcagga
cagaagaggcacgcgctgcgctgctactgccaagccatgcaggtctacaaggagcggggc
tggtctttggccgaggatcacatcaacttcaccatcggtcgtcagtccttcacactcggc
cagctagagaatgctgtgacggccttcagacagatcctgaccaatgacagcaggcagacg
gccacacagcagggcgccttcctcagagaatacctctatgtgtataagagtgtggtaggg
ggaaatgaagacagcctcccccagctgcctctgccctgcatccacagctcggccacacgc
gtctacttcggacacgaacggcgccttgcagaaggtgaaaagcaggcagccactcatgtg
tctctggaccaggagtatgatcaggacctggcagtcatgtggtgccacctggaggaacag
cttgtggctgcagccaacagggggattgtcccagcaactttccaccccacccagtgctgc
ttgaacagccagacagacaacctgcgcttcccactggctgtagccgaggagccaatcata
gtggaggtgatgttcaggaaccctctgaaggttcctctggctctgtccaacctctcacta
ctctggaggttcactgccgagggtgcaactccatccgaagagaagacgactgacgagtca
gcaggagaggccgtcaccaatgaggagacgctgactgaagggacgacacagaaagacgac
gtcgtaaccacagagatcatcctggagtttcttttgggtccagaggagaccaaagtggct
cgactccggctgctgccccacagaactggccagctgaacattgtgggtgtggtttacaac
ctggctgcggcctcctctggagagccggctcccagcgctgaaggccagcaggcgttggag
ctcatggtggttcggggcagacaggacctgaagatccagggcccacgactgaaccagacc
aaagaggacaagatgttggttcgatatggtcaggatcggcgactggatcccatcataact
ccaccaatgcccctaatggagatcttcttcctgcagttccccactgctctgctgtgtggt
gagatcaggaaggcctacgttgagttctgtaacatcagcagcgtcgctctgtgcggcctt
cgggtggcgtccacacacccggatttcttcacgtttggcagccagaccacgacccccctc
acacccgtcagcccgacttcaggagagaactgctcggcctataaaaccacggcaactacc
cgagagccgggctcagtggcgtctgagacgctggtatcggcgaaggatttcagccaactc
tccggtgtgatggagatcccgatagaaggcagcacactgcaaccgggggagtccacactg
ctgcctctctggctcagaggcccagaccaggagggagtccatgagatcaacttcctgttc
tactacgagggcacaaagaaaggaatcaaaatcagtcatcgggtgttgcgtcactcagtg
ttcatctgtgccagtcgctctctgagcgtgcaggcgtcggcctgccgcagcagcgtcccc
ccgcatcacagtgtggacgacaaaggtagtggcggaacgctggtcttcgtcgatgtggag
aacatcaatacgagtgaagctggcgtgcgtgagttccacatcatccaggtgtccagcagc
agtaaacactggcgcctccacaagtgtatcaacccggccaatgacaaagactgtaaactc
ggcagcagagaaagagccaagctgtgtttcagagccacgcgatgcaagccccaccaagct
acctcggctgccgtagagaaatacacctttgcagacctgaatctgggaaatgaacggatc
atcagctcctccactccctgtggagatttcttcttccgcggctgtcggccctcggagtct
aagcgagtggaggtgacgtcgtccaggatgtcatccagcagcaagagtccggtgtctgac
atcagcagcatcatcaggaagtgtaatgagctggacctcaacatcatcgtcatctggaag
gcctatgtggtggaggacaacaaacagctgatcctagagggccagctccatgtggcgctg
cagaccatcggcaaagaggccagttctctgactcccaaagaggaagctcaggagatggtg
ctgctcaagtttaaagcagaagttcctgctccagtggccccgccctctgcagagctgtcc
caactcatcaagaccaacctgcactaccccgagacctacacacacccgtttgccctggag
agtctctgtgtggtgccggtcaccctgactctgtccaactgctcctcggctccagtggac
gtcctcattgacttaaggcacaaaagcagcagcccagagtctctggaggtccacagctcg
ttcacctgggtgggtcagacccagtacaagctgcagctgaagcctcaggaggtgctgtgt
ctgaccctgagagcctgtttcctccaggcaggagtctacaacctcaacacgccacgagtg
ttcgccaagctggccgagcagggcgccatgtgcgagacgagtcagcaggcggccagtccc
gccctcatcatcatcaacagtgcccgagtggagcctcaggggggcgtactcggtcttctt
gattga
DBGET
integrated database retrieval system
