Pseudoliparis swirei (Mariana hadal snailfish): 130194942
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Entry
130194942 CDS
T09868
Name
(RefSeq) dynein axonemal intermediate chain 4-like
KO
K24723
dynein axonemal intermediate chain 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130194942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130194942
04812 Cytoskeleton proteins [BR:
pswi04812
]
130194942
Cilium and associated proteins [BR:
pswi03037
]
Motile cilia and associated proteins
Dynein arm
130194942
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130194942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML_2
DNAI3_WD
Beta-prop_EIPR1
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_Aladin
Beta-prop_NUP159_NUP214
Beta-prop_BBS7
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT122_2nd
WD40_Gbeta
PAC11
ThiI
Motif
Other DBs
NCBI-GeneID:
130194942
NCBI-ProteinID:
XP_056272143
LinkDB
All DBs
Position
6:complement(5410799..>5425148)
Genome browser
AA seq
834 aa
AA seq
DB search
RSLFSIHFRLVAKSSSSSLSRRSPLVGGRIKNQKRITNQAPKKAVRVLNEDGKDVTPLRL
CRAEPREESQPGRYFLHTLFTSSGSDHLGSTSSSIVLSPYSSYLESSQRYLTMSQTTGES
ENSVFQPVNHQATSEVPRKRDNMKEDVAEEMLDGFLNICLSDTISLLDIPSTIVFEEDDD
AEGVKERKVQYAELCKNRVGNDKYMARSTQTLNGAPKSKPTQTYKMAAVDEGTVVSSCDI
YDSMNNQNETLESGEKAAYPVTTGNTSKGQEKRERSSSSTTVRTGTTMSSQLEEDIFLHC
EDSVKADYDLQLILSSESFKCSLFVMERSVVANTFQTKLAAYKQLPVLKDPDSTVEPGTE
ERSEEGEEGSSSPMLKYLLDFSCELTRGSNATSMAWNKKNPDILAVGYGDYDSRNQKQSL
ICCWCFKNPTWPERIIHCHSCVISLDFSANNASQLAVGMDDGTMAIYDISQSSSTCIADS
SKCLKKHMHPVWQVKWIQQAIASSGQERTEALISVSADGRISKWFLCSDGLDCLVLMKLH
KKNVEKKKPEQRLSIPMNPGLCVDFNPTDTSIYVVGTWEGPIHKGCISNNMHFLGTYQQH
SCPVNGIEWSPFNSSVFLSCSSDWTIQLWRKDLFVPVMSFTSTQKDVHAVKWSPNWSTVF
AAHNGEQVEIWDLNASILLPLIVHRAADGVKVKSLMFTKGTDCVLVGDSYGQVTVYQIKN
LSVGEDKKEVDSLENIVNAADEIIQVYTKKETQAVVEDQDQNQNQDRAAVKGSPVLRNTD
TYTNRPKDKDCFLTEIRCFLHKFAPTVKRSEFKTQFVFIIFSGRMKESVHFDVK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
cgctcgctcttctcgattcatttcaggctcgttgcaaagtcttctagcagctcactgagc
agaagaagtcccttggtcggaggcaggatcaagaatcagaaaaggatcaccaaccaagct
cccaaaaaagcagtccgggtgttgaacgaggatggcaaagacgtcactcctctgcggctg
tgtcgtgcagagccacgagaagagtcccaaccaggcagatactttctgcacacactcttt
accagctcgggatcagaccacctgggatccacttcaagctccattgtgctttctccttac
agctcatatttggaaagcagccaacgatatctcacgatgtcacagaccactggagagagc
gagaatagtgtttttcaaccagtaaaccatcaagctacaagcgaggtgccgaggaaaaga
gacaacatgaaagaggatgtggcagaagagatgctggatgggttcttaaacatctgcctc
tcagataccatttcactgctggacatacccagcaccatcgtgtttgaggaggatgatgat
gccgaaggtgttaaagaaagaaaagttcaatatgctgagctttgtaagaacagagtgggc
aacgataagtacatggcacgatccacacagacgttgaatggagcgcccaaaagcaagccc
acccagacttacaagatggctgcggtggatgaagggacggtggtttcttcctgtgacatc
tatgactctatgaacaaccaaaatgaaaccctggaaagtggagagaaggctgcgtatcca
gtgactaccgggaacaccagtaaaggtcaagagaagagagaacggagcagcagcagcacc
acagtccgcacgggcaccaccatgagctcacagttagaagaggacatttttttacactgc
gaagacagcgtgaaggctgattacgacctgcagctcatcctgtcctcagagtcgtttaaa
tgcagcttgttcgtgatggagaggagcgtcgtggcaaacacatttcaaaccaagctggcc
gcttataaacagctgcccgtactgaaagaccctgacagcacagtggagcccgggaccgag
gaacggagcgaggagggtgaggagggctcttcatctccaatgctgaaatacctcttggat
tttagctgcgagctcaccagaggaagcaacgctaccagcatggcctggaacaagaagaac
ccggatatcctggcagtgggttacggtgactatgactcaaggaaccagaagcagagtctg
atctgctgctggtgcttcaagaacccgacgtggccggagcgcatcatccactgccatagt
tgtgtcatatccctggatttctcggccaacaacgccagccagctggctgtggggatggac
gacggcacgatggccatctacgatatcagtcaaagcagcagcacgtgtatcgccgacagc
agcaaatgtttaaaaaagcacatgcacccggtgtggcaggtcaaatggatccaacaagcg
atcgcatcatcgggccaggaaaggaccgaagctctcatctccgtgtcagcggacggccgg
atctccaagtggttcctctgcagcgacggtcttgactgcttagtcctgatgaagctccac
aagaaaaatgtggaaaaaaagaagccagaacagaggctgtcaatcccgatgaatcctggt
ctgtgtgtggactttaatccgacggataccagtatctatgtggttggcacgtgggagggg
cctatccacaagggctgcatctccaacaatatgcatttcctgggaacttatcagcaacac
tcgtgccccgtgaacggcattgaatggtctccgtttaattcctccgtgttcctgagctgc
tcctctgactggaccatccagctgtggaggaaggacctcttcgtccccgtgatgagcttc
acgtccacccagaaggacgtgcacgccgtcaagtggtccccaaactggtccacggtgttc
gcggcacacaacggagagcaggtggagatctgggacctgaacgcgagcatcttgctccca
ttaattgtgcaccgagccgccgatggcgtgaaggtgaagtccctgatgtttaccaagggg
acagactgcgtcctggtcggggacagttacggccaagtgaccgtctaccagatcaagaac
ctcagcgtgggagaagacaagaaggaggtggacagtttggaaaacatcgtgaacgctgca
gacgaaatcattcaggtttacacaaaaaaagagacccaggctgtagtggaggaccaggac
cagaaccagaaccaggaccgtgctgcagtaaaagggagtccggtgctcaggaacaccgac
acgtacaccaaccgtcctaaagataaggattgtttcctgacggagatcaggtgcttcctc
cataaattcgctccaactgtcaaaaggtcagagttcaaaacacaattcgtctttattatt
tttagcggcagaatgaaagaaagtgtgcattttgatgtaaagtaa
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integrated database retrieval system
