Pseudoliparis swirei (Mariana hadal snailfish): 130198021
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Entry
130198021 CDS
T09868
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130198021 (matn1)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
130198021 (matn1)
BRITE hierarchy
Motif
Pfam:
VWA
VWA_2
VWA_3
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF_3
Copine
hEGF
Motif
Other DBs
NCBI-GeneID:
130198021
NCBI-ProteinID:
XP_056277037
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All DBs
Position
1:10580794..10585086
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AA seq
480 aa
AA seq
DB search
MTPTSPLFLLLLSLIGAQATVDLRTAAAMAAGLCKTRPTDIVFIIDSSRSVRPSEFEQVK
VFLAKVIEGLDVGPNATRVGVVNYASRVKNEVSLKTHRTKAGLIKAVTKIEPLSTGTMTG
LSIQFAINVAFSEAEGARVKSPNISKVAIIVTDGRPQDMVKDVAQRARDAGIEIFAIGVG
RVDMSTLKQMASDPLDDHVDYVESYSVIEKLTKKFQEAFCVSDLCATGDHDCEQMCISSP
GSFKCACKDGFTLMDNDRSCSACSNSATDVVFLIDGSKSVRPENFELVKKWINQIVDKLD
VSDSKAHVGLVQYSSSVRQEFPLGRYNNKKDLKEAVKKMAYMERGTMTGQALRYLTDNSF
SAGQGARPGIAKVGIVFTDGRSQDYIGEAAKKAKQHGFKMYAVGVGNAVEDELKEIASEP
TAEHYFYTADFKAMTQIAKKLQINICQEEDTCECDSLVKFQKKVEDALQALTKKYILYNG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgacatcgccgttgttcctgctgctgctcagcctcatcggagctcaggccacc
gtggacctccgcacggccgccgccatggcggcaggtttgtgcaaaactcgtcccacggac
attgtgttcatcatcgacagcagtcggagcgttcgcccttcagagtttgagcaggtcaag
gtcttcctggctaaggtcatcgaggggctggacgtgggacccaacgccacccgcgtggga
gtcgtcaactatgccagccgcgtcaagaacgaggtgtctctgaagacgcaccgcaccaaa
gccggcctgattaaggctgtgaccaagatcgagcctctgtccacgggaacaatgaccggt
ctgtccatccagtttgccattaatgtggccttcagtgaggccgagggcgcccgcgtcaaa
tctcctaatatcagcaaggttgccattattgtgacagacgggcgtccccaggacatggtg
aaggacgtggcccagcgtgcacgggatgccggcattgagatttttgccatcggcgtggga
cgtgtggacatgagcaccctgaagcagatggccagtgatcctctggatgaccacgtagac
tacgtggagagctacagcgtcatcgagaagctcaccaagaagttccaggaggccttctgt
gtatctgacctgtgtgccactggcgatcatgactgtgagcagatgtgcatcagctccccc
ggatcattcaagtgtgcctgcaaagatggctttaccctcatggacaatgatcgcagctgc
agtgcttgcagcaactcagcgacagacgtggtgttcctgatcgatggctccaagagtgtg
cgtccagagaactttgagctggttaagaagtggatcaaccagatcgtagacaagctggat
gtctctgacagcaaggctcacgttggactggttcagtactccagctcagtcagacaggag
ttccccctgggccgctacaacaacaagaaggacctgaaggaggctgtgaagaagatggcc
tacatggagaggggaaccatgacaggccaggccctccgctatctgacagacaacagcttc
agcgccggtcagggcgcccggcctggaatcgccaaggtgggcatcgtcttcactgacgga
cgcagccaggactacattggagaggccgccaagaaggccaagcagcacggtttcaagatg
tacgctgttggagtgggcaacgcagtggaggacgagttgaaagagatcgcctctgagcca
accgcagagcactacttctacactgctgacttcaaagctatgacccagatcgccaagaag
ctgcagattaacatctgtcaagaggaggacacctgtgaatgtgactccctcgtaaagttc
caaaagaaagtagaagacgccctgcaggcactaacaaaaaaatatatcctttacaatggg
tga
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