Pseudoliparis swirei (Mariana hadal snailfish): 130198096
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Entry
130198096 CDS
T09868
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130198096
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130198096
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
RSS_P20
zf-RING_10
HycH
COG5_N
Motif
Other DBs
NCBI-GeneID:
130198096
NCBI-ProteinID:
XP_056277152
LinkDB
All DBs
Position
8:4202318..4204497
Genome browser
AA seq
424 aa
AA seq
DB search
MAQKGVQLDRETFSCCICLDLLKDPVTIPCGHNYCMNCIKSHWNKEDVKKLYSCPQCRQD
FTPRPVLGKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRRLKAFKSCLVCL
ASYCKKHLQPHYDSPTFKKHKLVDPSNKLQENICSRHNEVMMIFCRTDQQCICYLCFKYE
HKGHNTVLAVAERTKRQRKLEGSRLNIYQRILNREKDLKLLHQEVEDINVSADETVKHSK
KTFTELIRLMQKSRSDVKQQVRSQQRTELSGVKRLQEKLEQEITELKKSDAELEKISQSE
DLNQFLLNYPSLSPLSESRDSSSINIRPLSYFEGVSDAVSEIRDELLEFMEEEWPNVSLA
LRGVDASRLSPMAEVKIKKPKSRKKRQPRDGNGWSQHRDGNGWSQHGDGNGCRQPYFDEE
DWSD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaaggagttcagctggaccgggagaccttctcttgttgcatctgtctggat
ctcctgaaggatccggtgactattccctgtggacacaactactgcatgaactgtattaaa
agccactggaataaagaggatgtaaagaaactctacagctgccctcagtgtaggcaggac
ttcacaccgaggcctgtcctggggaagaacaccatgttggcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggagactgaaggcgtttaagtcctgtctggtatgtttg
gcttcttactgtaagaaacatcttcagcctcattatgactcaccaacatttaagaaacac
aagctggtggacccctccaacaagctccaggagaacatctgctctcgtcacaatgaggtg
atgatgatcttttgccgtactgatcagcagtgtatctgttatctctgcttcaagtatgaa
cacaaaggccacaacacagtcttagctgtagcagaaaggaccaagaggcagagaaagctg
gaggggagtcgactaaacatctaccagagaatcctgaacagggagaaagacctgaagctg
ctccatcaggaggtggaggacatcaacgtctctgctgatgaaacagtgaagcacagtaag
aagaccttcactgagctgatccgtctcatgcagaaaagtagatctgatgtgaagcagcag
gtcagatcccagcagagaactgaattgagtggagtcaaaaggcttcaggagaagctggag
caggagatcactgagctgaagaagagcgacgctgagctggagaagatctcacagtcagag
gatctcaaccagtttctactcaactacccctcactgtcacccctcagtgagtccagagac
tcatccagcatcaacatccgtcctctgagctactttgagggcgtgtcagacgctgtttca
gaaatcagagatgaactactggaattcatggaagaggaatggccaaacgtctcactggcg
ttgagaggagtggacgcttcacgattgtctccaatggcagaggtcaagatcaagaaacct
aaatcaaggaaaaaacgtcagcctcgtgatggaaatggttggagtcagcatcgagatgga
aatggttggagtcagcatggtgatggaaatggttgcagacagccttattttgatgaagaa
gattggagtgactga
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