KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130198219
Entry
130198219         CDS       T09868                                 
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
  KO
K12006  tripartite motif-containing protein 16
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130198219
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130198219
Motif
Pfam: zf-C3HC4_4 PRY SPRY zf-C3HC4 zf-B_box zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 U-box zf-RING_2 zf-RING_5 Prok-RING_4 zf-ANAPC11 zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 130198219
NCBI-ProteinID: XP_056277337
LinkDB
Position
8:2217652..2219325
AA seq 541 aa
MAQKGVQLDQETFSCSICLDLLKDPVTIPCGHSYCMNCIKAHLDKEDGKKLHSCPLCRKT
FTPRPVLLKNTMLAALVEQLKKTGLQAAPADHCYAGAEDVACDVCTGRRLKAFKSCLVCL
ASYCEKHLQPHYDSAPLKKHKLVEPSNKLQENICSRHNEVMKIFCRTDQQCICYLCLMNE
HKGHDTVSAAAERTERQNELEGSRLNIQQRIQDREKYLKLLHQEVEALNLSANKTVEDSE
KIFTELIRLMVNRSSDVKQQVRSRQRTEVSRVQELQEKLEQEITELKRNEAELKLLSHTE
DLKQFLLHYPSLSPRAESTHSSGIDIRPLRHFEDVTAAVSEVRDKLQDVLREKWTNPKTR
AGFLKYSCELSLDPDTATTWLLLSDEDRKATLMREEQSYASHSDRFSGCDQVLSRESLMG
RCYWEVKWRGEGVDVAVAYKNISRKGNGDECVFGYNNKSWALRCNKNGCNFRYNNVQTPV
SGPQSSRLGVYLDHRAGILSFYSVSDTMTLLHRVQTTFTQPLYAGLHPFSYGDTAELCNL
K
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggcgcaaaaaggagttcagctggaccaggagaccttctcttgttccatctgtctggat
ctcctgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
gcccacttggataaagaggatgggaagaaactccacagctgccctctgtgtaggaagacc
ttcacaccgaggcctgtcctgctgaagaacaccatgttggcagctctagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggagactgaaggccttcaagtcctgtctggtgtgtctg
gcttcttactgtgagaaacatcttcagcctcattatgactctgctccattaaagaaacac
aagctggtggagccctccaacaagctccaggagaacatctgctctcgtcataatgaggtg
atgaagatcttctgccgtactgatcagcagtgtatctgttacctctgcttaatgaatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagaatgagctg
gaggggagtcgactcaacatccagcagagaatccaggaccgagagaaatacctgaagttg
ctccatcaggaggtggaggccctcaacctctctgctaataagacagtggaggacagtgag
aagatcttcactgagctgatccggctcatggtgaacagaagctctgatgtgaagcagcag
gtcagatcccggcagagaactgaagtgagtcgagtccaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaacgaggctgagctgaagctgctgtcacacacagag
gatctcaagcagtttctactccactacccctcactgtcaccacgcgctgagtctacacac
tcgtccggcatcgatatccgtcctctgagacactttgaggacgtgacggcggctgtgtca
gaagtcagagataaattacaggacgttctgagagagaaatggacaaaccccaagaccaga
gctggattcttaaagtattcatgtgagctctctctggatccagacacagcaaccacatgg
ctgttattatctgatgaggacagaaaagcaactttaatgagagaagaacagtcttatgct
tctcactcagacagattcagtggatgtgatcaagtcctgagtagagagagtctgatggga
cgttgttactgggaggtgaagtggagaggagaaggagttgatgtagccgttgcatacaag
aatatcagcagaaagggcaacggagatgaatgtgtctttggatataataacaaatcttgg
gcattaagatgtaacaaaaacggttgtaactttcgatacaacaatgtccaaactcctgtc
tctggtcctcaatcctccagattaggagtgtacctggatcacagagcaggaattctgtcc
ttctacagcgtctctgacaccatgactctcctccacagagtccagaccacattcactcag
cctctctatgctggacttcatcctttcagttatggagacactgctgagttgtgtaatctg
aaatag

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