Pseudoliparis swirei (Mariana hadal snailfish): 130198628
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Entry
130198628 CDS
T09868
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130198628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130198628
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pswi04054
]
130198628
04090 CD molecules [BR:
pswi04090
]
130198628
04091 Lectins [BR:
pswi04091
]
130198628
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Phagocytosis
C-lectin receptors
130198628
Pattern recognition receptors [BR:
pswi04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
130198628
CD molecules [BR:
pswi04090
]
Proteins
130198628
Lectins [BR:
pswi04091
]
C-Type lectins
Group 6: Mannose receptor family
130198628
BRITE hierarchy
Motif
Pfam:
Lectin_C
fn2
UL45
Chordopox_A33R
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
130198628
NCBI-ProteinID:
XP_056277834
LinkDB
All DBs
Position
8:complement(6658144..6672840)
Genome browser
AA seq
1436 aa
AA seq
DB search
MRRLRLIRRMKITCTAFVLLIQTLQCLASDDSPFQLTNKDTGFCLVKTNSDCNDLRWTTG
DRLLVLQTKKCLGVQGKSVGSEINRYDCDEKSDLQRWECKNGTVLALKDQELYVELTADS
TAVLSKTIGPNNHLTITGTSNGACARTYRELFALDGNAPGLPCMFPFQYNDQWYTDCTTV
DSPEKHLWCALETKYQTERWGYCPSTSKEDWTVHPTTGAYYQLNTRSAVTQPQAEASCKQ
QGASLLSITDPHQQAYVTALLDKEGNMLWSGLILDPEHGWMWSNGRPYRYLKWDSGHPLP
NPGHNCAILDPAVQYSWQSVPCSKKVGYICYSEVAEIPPAQAGVKGFCSSPWIFYNGHCF
HLNRTQKTWPDAQRACRNDGGDLVSISNVEDQSFVISQLGYISTDELWIGLNDRKTERLF
EWSDHSTVTFTSWEYGKPAVSTDIKDCVRIRGENGNWDDRVCEEKRGSICMKLSASKPSG
DEVRQDVGCKTGWIRYGSYCYFIGTQTKTFDEAKNDCRTLDSNLADVSNRVDNAFLISLV
GLRPEKYFWLGLSNRKNIDEFAWINTDLVKYTHWNALMPGHQQGCVAMTTGFLAGLWDLL
PCTNKEKYICKHLAEGAVVTPAPPSLNASVCEKGWTRIGLRNSCNKVFKSVKKRTWFDAR
DYCKVIGGDLLSIHSADELNSLPDRYGRVWIGLSAPDSVNGYQWSDGSPLQFQHWEDGEP
NNKNNVESCTEINMDQRGSSGSWNDAHCESYRNWVCQIPAGVTPNPPPDPVAPEYNRTSD
GWLEWNGAQYYFNNRQSKAMEEARSFCQQMHSDLVVINSEAESVFLWKQISTNYGVYWIG
LNVDLDKTYSWMDGSPVVLQRWDENQPSFQRNDENCAAMTQFMGFWHVYNCGQEHKFICK
RSGSPSANATVAPTVSPKGGCPQNWQKIDSKCFSIINNQKETWHGAKTQCKAKGGNLASI
LSREVQVFLMTKLLEAPATDLWIGLYNVRGSPFLWTDGRPTRYVYWGTDRMRQYAYDMDH
GFLLQQRKEKACALMNTNPIIGIGKWIKRSCNDTNGYVCLRNVDISIPDSPEPPMTDYVN
IFNDSFKLVSQKMTWGAAKKNCESDGAKLASLRNQWSEIYVELLALKFKSPMWIGLNKIE
TAGYFRYIDGWRIVRTNWASRQPRANRPCVFVDLEGKWNTADCDQKTTSICMKSTDVPPT
ESSAFPGYCPDNPEQSRQRKHVISWLTFRGYCYLISTDTLSWPDASASCARHGGSLASIE
DPPEQVFIQNNIALFQDSQMSFWIGLYKTHTDVWQWLDKTAMDYTNWRSLDQSSSSYGSM
TATDGTWVTGHRWYDRGYICKTSKRIQASQTTGKPVLEPQSRGRNILPVVLVITVIAIGT
AIALFLFKRSGRRLSIPKKLSTFDNPLFSNNERYQPDTSELVSNAEENPAGPALAV
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctcaggctaatacgaaggatgaagataacatgtacagcctttgtgctcctc
atccaaacgttacaatgtttggcttcagatgattctccatttcagctaactaacaaagac
actggtttttgtttggttaaaacaaacagcgactgcaatgacttgcgctggacgactggc
gatcgacttctggttctgcaaactaagaagtgcctgggcgtccaggggaaaagtgtggga
agtgaaataaaccgctacgattgtgatgaaaagagcgacctccaaaggtgggaatgcaag
aatggaacagtgctcgccctcaaagaccaagagctctacgtggagctcactgcagactcc
acagcggtcctctccaaaacaatagggcccaataaccacctcacaattacagggacatcc
aacggcgcttgtgcaagaacataccgagaactctttgcacttgatggaaacgctcctgga
ctgccatgcatgtttcccttccagtacaatgaccagtggtacacagattgcacgacggtt
gactctccggaaaagcatctctggtgtgcgcttgagactaaataccaaactgaacgctgg
ggttactgcccgagtacttccaaagaagactggactgtccacccaacgacaggagcgtat
taccagctcaacacacggtcggctgtgactcagccacaggctgaagccagctgcaagcag
cagggggcctccctgctcagcatcaccgaccctcaccagcaggcttacgtcacagctcta
ctagacaaagagggcaacatgctttggtctgggctgatcctggatccagaacatgggtgg
atgtggtccaacgggaggccataccgctacctgaaatgggattcaggacatccgcttcct
aatccgggacacaactgtgcaattcttgaccctgctgtacagtactcctggcaaagtgta
ccttgcagcaagaaagtcgggtacatctgctacagtgaagtggctgaaataccacctgca
caagctggtgtgaaaggattttgttcaagtccttggattttctacaatggccactgcttc
caccttaatcgtactcagaaaacgtggcctgatgctcagagagcgtgtcgtaatgatgga
ggggacctggtcagcatcagcaatgtggaggaccaaagctttgtcatctctcaacttgga
tacatatccactgatgagctttggattggacttaatgacaggaagactgagaggctgttt
gaatggagtgaccactctactgtcactttcactagctgggaatatgggaaacctgccgtc
tccactgatataaaggactgtgttcgaatcaggggagagaatgggaactgggatgaccgc
gtgtgtgaggagaaacgtggctccatttgtatgaagctgagtgcctcaaaaccctctgga
gatgaagtgcgacaggatgtaggctgcaaaactgggtggatacgatatggctcttactgc
tactttatagggacacaaaccaaaacctttgatgaggccaaaaatgactgcaggacgtta
gattctaacttagctgatgtttcaaatagggtagacaatgctttccttatcagcttggtg
ggtttgaggcccgagaaatacttctggttgggcctctcaaatcggaaaaacattgatgaa
tttgcgtggatcaacacagatttagtgaagtatactcactggaacgctctcatgccaggt
caccaacagggctgtgttgcaatgacaactggttttttggccggcctctgggatctgctg
ccctgcaccaataaggagaaatacatctgcaaacacctggcagagggagccgttgtaact
cctgcaccaccaagtcttaacgcttccgtttgtgaaaagggctggacacgaattggatta
agaaactcttgtaataaggtgtttaaatctgtaaaaaagaggacctggtttgatgccaga
gattactgcaaggtcattggaggagacctgctcagcatccacagtgctgacgagctaaat
tcgctacctgatcgctacggaagagtctggattgggctaagtgctcctgactcagtcaac
ggttatcaatggagcgatggatccccactgcagttccaacactgggaagatggagaacca
aacaataaaaacaatgtggaatcttgcaccgaaattaacatggatcagcggggtagtagt
gggtcttggaacgatgcgcactgtgaaagttatcgcaactgggtgtgccagattcctgca
ggagtgactccaaatccgcctccagaccctgtcgctcctgaatacaataggacctccgac
gggtggctagaatggaacggggctcagtattattttaataacagacagtcgaaggccatg
gaggaagctcgtagcttctgccaacagatgcatagtgacttggtagttatcaacagtgaa
gctgaaagtgtctttttatggaaacagatttccactaattatggggtttactggataggc
ttgaacgtagatcttgataaaacatatagttggatggatggttctccagtggtgttacaa
aggtgggatgaaaatcaaccttctttccaacgcaatgatgaaaattgtgctgccatgact
caatttatggggttctggcatgtttataattgtggacaagagcacaagttcatttgtaag
cggagcggctcgccatctgcaaacgccacagtcgcaccaacagtttctccaaaaggcggc
tgtccacaaaactggcaaaaaattgactcaaagtgtttcagcatcattaataaccagaag
gagacatggcatggagcaaagacgcaatgcaaagcaaagggagggaatctggcttcaatt
ttgtcgagagaagtgcaagtgtttttgatgactaaattgttggaggcacctgccacagac
ctgtggattggtttatataatgtacgcggtagtccattcctctggactgacggccgacca
acgcgatacgtctattggggaactgatcgcatgagacaatatgcatatgacatggatcat
ggctttctcttgcaacaacgtaaagagaaagcatgtgctttgatgaacaccaatcccatc
attggtattgggaaatggataaaaaggtcctgcaatgacaccaatggatatgtctgtctt
cgcaatgttgatatttccatcccagactcccctgaaccaccaatgaccgactatgtcaac
atattcaatgactctttcaagcttgtttctcaaaaaatgacgtggggtgcagccaaaaag
aactgtgaaagtgacggtgccaaactggctagcctgcgaaaccagtggtcagagatctat
gttgagcttctggcgttgaaattcaaaagtccgatgtggattggactaaacaaaatagag
actgcgggatatttcagatatattgacggctggcgcatcgtcagaaccaattgggcaagc
aggcaaccgagagcaaaccgcccatgtgtgttcgtggatcttgaaggaaaatggaacacc
gccgactgcgatcagaaaacgaccagcatttgcatgaagtccacagatgtgccaccaaca
gagtcgagtgcttttccaggatattgccctgataacccggaacaatcaagacaaagaaaa
catgtcatcagctggctaacatttaggggttattgttacctcattagcacagatactctg
tcatggccagatgcatctgctagctgtgcaagacatggtggatctcttgccagcattgaa
gatccccctgagcaagtattcattcaaaacaatattgcattgtttcaagacagccaaatg
tcattctggatcggcttgtataaaactcacacagacgtgtggcagtggttggataaaact
gccatggactacactaactggcgttctcttgaccaaagttcctccagttatggatcaatg
acagctacagatgggacgtgggtaacaggacaccggtggtatgacagaggatacatttgc
aaaacctctaaaagaatacaagcatcacagacaactggaaagccggtgctggaacctcaa
agccgtggccgcaacattttgccagttgtgctggtcattactgtgattgccatcggaaca
gccatcgccttgtttctcttcaagaggtctggacgccgcttgtcaatccctaaaaagtta
tctacctttgacaacccactcttctccaacaatgagcgctaccaacctgacaccagtgaa
ctggtatcaaacgcagaggagaaccctgcaggccccgctctagccgtgtga
DBGET
integrated database retrieval system
