Pseudoliparis swirei (Mariana hadal snailfish): 130199819
Help
Entry
130199819 CDS
T09868
Name
(RefSeq) keratin, type II cytoskeletal cochleal-like
KO
K07605
type II keratin, basic
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130199819
04147 Exosome [BR:
pswi04147
]
130199819
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
130199819
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130199819
Exosomal proteins of other body fluids (saliva and urine)
130199819
Exosomal proteins of colorectal cancer cells
130199819
Exosomal proteins of bladder cancer cells
130199819
BRITE hierarchy
Motif
Pfam:
Filament
TPR_MLP1_2
Keratin_2_head
ATG16
CENP-F_leu_zip
DUF4349
Crescentin
Cep57_MT_bd
Fib_alpha
TSNAXIP1_N
Sec10_N
DUF1192
DUF5082
DUF1664
ADIP
COG6_N
MRFAP1
Cob_adeno_trans
Taxilin
APG6_N
Prefoldin
DUF724
UPF0242
DUF4618
Motif
Other DBs
NCBI-GeneID:
130199819
NCBI-ProteinID:
XP_056279592
LinkDB
All DBs
Position
9:2357964..2361623
Genome browser
AA seq
509 aa
AA seq
DB search
MAFRPPSLINFSSDGTSVSGGGGLGSISFGGGDSLSNSSRSMVLNNKGIPSSATGSMSFG
KQSMGGGGGFSYPTGIFGGGGAYGGGLGALTATMTAIQTNQSLLEPIDITIDPNIQIVRT
QEKDQIKGLNNRFADLIDKVRTLEVQNKKLETKWGLLQQHTTTQVNIDGMFEAYIGNVRK
QLDGLGNEKGQLGGQLGNMQNMVEDFKNKYEDEINKRANTENDFVLFKKDVDGTYMNKVD
LEASVDSLQDDINFLKAYYESELRDLQGEIMDTSVIVKMDNTRDLDMDSIVAEVKAQYEA
IANTSRQDAEQWYQQKYQEMETNVGNAGDDLRNSKSEITELSRMISRLQNEIESLKAQRG
NLEAHIAEADERGELAVKDAKARIRDLEQALQKTKQEMALQVREYQDLMNIKLALEIEIA
TYSKLLEGEEERINSGGATATVHVQSSGGGGSSSSGGGGGYGGGIGGGGSYGGGIGGSGG
GMGVGGGSYGGSYGTSSGGGGSSSQSRRY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcgtccaccgtccttgataaatttcagtagcgatggaacctccgtgagtggt
ggtggaggcttaggcagcattagttttggtggtggtgatagcctatcaaattcctccaga
tctatggtgctcaataacaaaggaatcccatccagtgcgaccggcagcatgtcctttggt
aagcaaagcatgggtggtggtggcggcttcagttatcctactggtatttttggtggtgga
ggtgcatacggcggcggtcttggagccctgacagcgaccatgacagccatccagaccaac
cagtccctgctggagcccattgacattacaatcgacccaaacatccagattgttcggaca
caagagaaagatcagatcaagggtctgaacaaccgcttcgccgacttaattgacaaggtc
cgcaccctggaggtgcagaacaagaagctggaaaccaagtggggcctcctgcagcagcac
accaccacacaagtcaacattgacggcatgttcgaggcctacatcggcaacgttcgcaag
cagctggatgggctcggcaatgagaagggccagctgggcggccagctggggaacatgcag
aacatggtggaggacttcaagaacaaatatgaagatgaaatcaacaagcgtgccaacacg
gagaatgactttgttctttttaagaaggatgtcgatggcacatacatgaacaaggtggac
ctggaggcctcagtggactcccttcaggatgacattaacttcctcaaagcctactatgag
tcggagcttcgtgatctccagggagagatcatggacacctcagtcattgtgaagatggac
aacacccgtgatctggacatggactctattgtggctgaagtcaaggcccagtatgaggcc
atcgctaataccagccgtcaagatgctgaacagtggtatcagcagaagtaccaagagatg
gagacaaatgtaggcaatgccggggatgatctccgtaactccaagagtgagattactgag
ctcagccgcatgattagccgcctccagaatgagattgagtcattaaaggcacagcgcggc
aacctggaggcccatatagctgaggccgatgagcgtggtgaattagccgtgaaggacgcc
aaggcccgcatcagggacctggaacaagccctgcagaaaaccaagcaggaaatggccctc
caggtccgcgagtaccaggacctgatgaacatcaagctggctctggagattgagatcgcc
acctacagtaagctgctggaaggagaggaggagagaatcaacagtggaggtgcaactgca
accgtccacgtacagtcctccggtggcggcggcagcagcagcagcggcggcggtggagga
tatggtggcggcatcggaggcggcggcagctatggtggcggcattggaggcagtggcggc
ggtatgggagttggtggcggtagctacggaggcagctacggcacaagcagcggcggtggc
ggaagctcctcacaatcccgccgttattga
DBGET
integrated database retrieval system
