Pseudoliparis swirei (Mariana hadal snailfish): 130203400
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Entry
130203400 CDS
T09868
Name
(RefSeq) transcription factor SOX-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130203400
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130203400
BRITE hierarchy
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130203400
NCBI-ProteinID:
XP_056285513
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All DBs
Position
13:complement(19690051..19692968)
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AA seq
436 aa
AA seq
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MTQDGIVRDLWDCTSRRSRAHLRTRRVPRRSDAFTRRRMTEESTTSLAEHPPRSPAGSGG
SGSLQRAAGSPEPPTPPARAPKTESGAETERFPACIRDAVSQVLKGYDWSLLPVPAHGER
ALKGQPRVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSETEKRPFVKE
ADRLRMQHKRDYPDYKYQPRRRKTPKPGPGGDSRPPGAQKQQVLYKTEPGGEVPHHGHAE
RTGHSHGPPTPPTTPKTELHAAPPPPGRQNIDFSHVDISELSAIDGFDVHEFDQYLPPGG
VHGSDGGHGHPAGPFVHSHSWTPKGGASAAITPPPPSTKLQIKTEQLSPDHCGGSSSSSS
TPPQPEYTPLASSTSSVNPPDLHGSGIYGGAFSGLYQYPYFHSSRRPYATPLALAPPPHS
PPSGWEQPIYATLSRP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggacggaatagttcgagacctttgggattgtacttccaggcggagccgtgcg
catttacgcactcggagagttccccggcgaagcgacgcgtttacccgccgaagaatgaca
gaggagagcacgacgtccctcgcggagcatcctccccgcagccccgcgggcagcggcggc
tccgggtccctgcagcgcgcggcgggttccccggagcccccgacccctccggcgcgcgcg
cccaaaacggagagcggcgcggagaccgagcgcttccccgcgtgcatccgcgacgcggtg
tcgcaggtgctgaagggctacgactggtcgctgctgccggtgcccgcgcacggggagcgc
gcgctgaagggccagccgcgcgtgaagcggccgatgaacgcgttcatggtgtgggcgcag
gcggcgcgccggaagctggcggaccagtacccccacctgcacaacgcggagctcagcaag
acgctgggaaagctgtggagacttctctccgagacagagaagcgtcccttcgtcaaggag
gccgaccggctgaggatgcagcacaagagagactacccggactacaagtaccagcctcgg
agacgcaagacccccaaacccgggccggggggggacagcagacccccaggggcccagaag
cagcaggtcttgtataagacagaacccgggggggaggtgccccatcacggccacgcagag
cggacaggtcattctcatggacccccgacgccccccacgacccctaaaaccgagctccac
gccgctcctccgccgccgggccgccagaacatcgacttcagccacgtggacatctccgag
ctcagcgccatcgacgggttcgacgtgcacgagttcgaccagtacctcccgcccggcggc
gtgcacggctctgacggcggccacggccaccccgccggacccttcgtccactctcactcc
tggacgcccaagggcggagcttccgccgccatcacgccgccgccgccgtccaccaaactt
cagattaaaactgagcagctgagcccggatcactgcggaggctcctcctcctcctcctcc
acgccgccgcaacccgagtacacgcccctcgcttcctccacttcctccgtcaacccgccc
gacctccacggctccggtatctacggcggcgccttctccggtctgtatcagtacccgtac
ttccactcctcccgccggccgtacgccacgccgctcgcgttggctccgcctcctcacagc
cctccctctggctgggagcagcccatctacgcaacactcagcaggccttga
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