Pseudoliparis swirei (Mariana hadal snailfish): 130206755
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Entry
130206755 CDS
T09868
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130206755 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206755 (gbf1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130206755 (gbf1)
BRITE hierarchy
Motif
Pfam:
Sec7
Sec7-like_HUS
DUF1045
Mon2_C
CYTL1
Motif
Other DBs
NCBI-GeneID:
130206755
NCBI-ProteinID:
XP_056290825
LinkDB
All DBs
Position
17:complement(4142621..4235332)
Genome browser
AA seq
1854 aa
AA seq
DB search
MVDKNIYIIQGEIGTVVGAIKRNSRWNTHTLLDEEQDPLLNSFGHLKELLNHIQELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSHGLIDADHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLINESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLYSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSASGQMDSTQSSTLSNNNLSGGVPFIEQGSSASSLPASDSAASSVSSPTATDSGLDTC
SKATSREDLSDLEQCNSSATTLPGSEPGSPDAHSEERRVGPAPSASVESIPEVLEDKDSV
TEQSDGSSIHDIDYVNPRGVRFTQSTQRDGATLIPYGLPCLRELFRFLISLTNPQDRHNT
DAMMHMGLQLLTVALESAHITNYQSLLGLVKDELCRHLFQLLSVDRMNLYTSSIRVCFLL
FESMRVHLKFQLEMYLKKLMDIITSENIKMPYEMKEMALEALVQLWRIPSFVTELYINYD
CDFYFSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSSAQQ
DQSDTLLAEGEASTANGTDTTADPIRLGSTSDLSLPPTENAPVCPPTSGHLMAEKMRLGR
QDQGESDSAEKRAPKKPQRFSSCLPDSQELVDIRTKKKLLITGTEQFNQKSKKGIQFLQE
KGLLSSPLDNDQVAQWLRENPRLDKKMIGEFVSDRKNMALLDSFVNTFTFQGLRIDEALR
LYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFVTNDAGFALAYAVIMLNTDQHNHNVR
KQNIPMTIEQFKKNLKGVNGNKDFDQDMLEDLYNAIKNEEIVMPDEQSGLVKDNYVWSVL
LHRGATPEGVFLHLPPGSYDHDLFTVTWGPTIAALSYVFDKSLDDNIIQKAITGFRKCAM
IAAHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNNKAQTAAKTVFDLAHRHGNIL
REGWKNIMDAMLQLFRAELLPKAMVEVEDFVEPNGKISLQRVETPSNRGESAVLSFVNWL
TLSGAEQSGLRGPSTENQEAKQAAVLCIKQCDPEKLITESKFLQLESLQELMKALISVTP
DEETYDEEDAAFCLEMLLRIILENRDRVSCVWQMVRDHLYHLCVHPNESCFLVERAVVGL
LRLAIRLLQREDISSQVLLSLHLLLMMKPPVLSRVSREVAFGLHELLKTNAANIHSTDDW
FTLFSLLECIGAGVKPPASFQLSSTSTDNDTGAQSDGELSSHHISEVTLDRGYTSDSEIY
TEHSKTRIPRSTTEVDVASSGWLVVGKDDLEMSKTPPVTSKAQLNNPLVNQYSLTLGQDH
GQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNQDKKKSHKY
DSSKSRMRKKAGGRDKEGGAGARRGGSRAANQRPSRSHSDEEEDEGVPASYHTVSLQVSQ
DLLDLMHTLHTRAASIYSSWAEEQRHLEAAGRKIEADSQTLWTSCWCPLLQGIAWLCCDA
RRQVRMQALTYLQRALLVHDLQTLDASQWEACFNKVLFPLLTKLLDNISPADVSGMEETR
MRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLL
VMDTAGIFHSADSGTGYSDLWEITWERIVCFLPHLREELFKQTVIPDPGPGPQAEPAQPS
SPRASPPPAQAPSPVNPAETRTSSRPASPLEPQPGSERSSPVPHSMASVPLTTSPPMGPS
PLSQSPLILQPLASPLQVGGPPMPLPIILNPALIEATSPVPLLPGPTSPAGEFK
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatctacatcatccagggggaaattggcaccgttgttggagcgatc
aagagaaactccagatggaatacccacactctactggacgaggaacaggacccactactg
aacagctttggccacctcaaggaattactcaaccacatccaagagctctctgacgtcgag
cccaatgttttcctgaggcccttcctggaagtggtccgctccgaggacaccaccggacca
atcacaggcctcgccctcacttctgtcaacaagttcctttcccatggccttatagacgcc
gaccatgaggccgcagcagaagccattgagaacatggccgacgccgtcacacacgccagg
tttgtgggaacggaccctgccagcgatgaagtggtcctgatgaagattctccaggtcctg
cggactctgctgctgaccccggtcggagcccacctgatcaacgagtccgtctgtgagatc
atgcagtcctgcttcaggatctgcttcgagatgcgcctcagcgagctcctcaggaagtca
gctgagcacacactggtggacatggtgcagctcctgtactccagactcccgcagttcaag
gaggaggccaagagctttgtgggcgccaacatgaagaagttgaagatgcgcgccggtggg
atgagcgagtcgtccaaatggaagaagcagaaacgctcgccgaggccgcctcgccacatg
gtccgaagtgcctccggtcagatggactcgacccagtccagcaccctcagcaacaacaac
ctttcaggcggcgtcccgttcatcgagcaaggctcgtccgcctcgagcctcccagcttcg
gacagcgcggcgtcgtccgtctccagccccacggccaccgacagtggcctggacacctgc
tccaaagccacctccagggaagacctttctgacctggaacagtgcaactcatcggccacc
acccttcctgggtccgagcccggctctccggacgcacattctgaggagaggcgggtcgga
ccggctccgtcggcctcggtggagtccatccccgaggttctggaggacaaagactccgtc
acagagcagtcagacggcagctccatccatgacatagactacgtcaatcccagaggtgtg
cgattcacacagtccacacagagagacggagcgaccctcatcccgtatggcctgccatgt
ctaagggagctctttcgcttcctgatctcactgaccaatccacaagaccgccacaacacc
gatgctatgatgcacatgggcctgcagctgctgaccgtcgcgctcgagtcggcacacatc
acgaactaccagtcgttgctcggactggtcaaagatgagctctgcagacatctcttccag
ttgctgagcgtggaccgcatgaacctctacacgtcctccatacgggtttgcttcctgctt
ttcgaaagcatgagagtgcatctgaagtttcagctcgagatgtacctgaagaagctgatg
gacatcatcacgtcggagaacatcaagatgccctacgagatgaaggagatggctctggag
gctctggtgcagctgtggaggattcccagcttcgtcaccgagctgtacatcaactacgac
tgcgacttctacttctccaatctgtttgaggacctcaccaagctgctgtccaagaatgcg
ttcccggtgtcggggcagctctacaccacccacctgctgtcgctggaggctctgctcacg
gtgatcgacagcaccgaagcccactgccaggccaaggtgctcaacagcagcgctcagcag
gaccagtccgacaccctgctggcggagggagaagcttccaccgccaacggaaccgacacc
acagccgatccaatcagactgggcagtaccagtgatctgagtcttcccccaactgagaac
gcaccggtgtgtccaccaaccagtggacatctgatggcggagaagatgagactgggcaga
caggaccaaggggagagcgactccgctgagaagagagccccgaaaaagccccaacgtttt
tcctcatgtttacccgattcccaggagctggtggacatcagaactaagaaaaagctgctg
atcaccggcacagagcagttcaatcagaagtccaagaagggaatccagttcctgcaggag
aagggcctgctcagcagccctctggacaacgaccaggtggcccagtggctccgggaaaac
ccccgactggacaagaagatgatcggcgagttcgtcagcgaccgcaagaacatggcgctc
ctggacagctttgtgaacacgttcaccttccaggggcttcgcatcgacgaggccctgcgg
ctctacctggaggccttcaggctccctggagaggctcccgtcatccagagactcctggaa
accttcacagacaactggcataaagtgaacggctctcccttcgtgaccaacgacgcaggc
ttcgccttggcctacgcggtcatcatgctgaacactgaccagcacaaccacaacgtccgc
aagcagaacatccccatgacgatcgagcaattcaagaaaaatctgaagggagtgaatgga
aataaagactttgaccaggacatgttggaggatctctacaatgctatcaagaacgaggag
atcgtgatgccggacgagcagtccgggttggtgaaggacaactacgtgtggagcgtgctg
ctccaccgcggtgccacgcccgaaggcgtgttcctccacctgccgcccggcagctacgac
cacgacttgttcaccgtgacctgggggcccaccatcgccgctctctcctacgtcttcgac
aagagcctggacgacaacatcatccagaaggccatcaccggcttcaggaagtgcgccatg
atagcggctcactacggcttcagtgacgtgttcgacaacttgatcatctccctctgcaag
ttcaccactctgagcagtgagtcggtggaaaaccttccgacagtgtttggcagcaataat
aaagcgcagaccgcagccaagacggtgtttgacctcgcccatcgacacggcaacatcctg
agggagggctggaagaacatcatggacgccatgctccagctgttcagagccgagctcctg
cccaaagccatggtggaggtggaggatttcgtagagcccaatgggaagatttctcttcaa
agagtggaaacgccttctaatcgcggggagtcggcggtgttgagtttcgtcaactggctg
acgctgagcggagccgagcagtcgggactcagagggccgtccacggagaaccaggaggcc
aagcaggcggccgtcctctgcataaagcaatgtgacccggagaagctgatcacagagagt
aaattcctccagctggagtctctccaggagctcatgaaggctctgatatcagtcaccccc
gacgaggagacctacgatgaagaggatgccgccttctgcttggagatgctgctgcggatc
attctggagaaccgagaccgcgtgtcgtgtgtgtggcagatggtgcgagaccacctctac
catctctgtgtccaccccaacgagagctgcttcctggtggagagggcggtggtgggactc
cttcggctcgcaatccgcctgctgcagcgagaagacatcagctctcaggtcctcctctcc
ctgcacctcctgctgatgatgaaaccccccgtgctctcccgggtcagccgggaggtggcc
ttcggcctccacgagctgctgaagaccaacgccgccaacatccacagcaccgacgactgg
ttcacgctcttctccctgctggagtgcatcggggccggagtgaagccccccgcctccttc
cagctctcctccacctccaccgacaacgacacaggagcccagtcggacggcgagctgtcg
tctcaccacatcagtgaagtgactttagaccgcggctacacctccgactctgagatctac
acggagcacagcaagacccggatcccccgctccaccacggaggtggatgtggcgagcagc
ggatggctcgtggttgggaaagatgaccttgagatgagtaagacccctccggtgacctcc
aaagctcagttgaataacccactggtcaaccagtacagtctgacgctgggtcaggaccac
ggccagcacgacaccaagtctctcatcaagtgcgtggagacgctgtcgttcatcgtccgc
gacgccgcccacgtcacgccggacaactttgagctgtgtgttcgagccatccgggtgttc
gtggaggcgagcctcaacggaggttaccgcaaccaagacaagaagaagagccacaagtac
gactcctccaagtcccggatgaggaagaaggcgggggggcgggacaaggagggcggagcc
ggagcgaggcgaggtggcagccgggcggccaatcagcgtccgtcgcgttcccacagcgac
gaggaggaggacgagggcgtgccggccagctaccacacggtgtcattacaggttagtcag
gatctgctggacctcatgcacactctgcacacgagggccgccagcatctacagctcctgg
gcggaggagcagcgccacctggaggccgcggggagaaagatcgaggccgactcccagacc
ctgtggaccagctgctggtgcccactgctgcaaggcatcgcttggctgtgctgtgacgcg
cggcgtcaggtccgcatgcaggcgctcacctacctgcagagggcgctgctggtccacgac
ctgcagacgctggacgcctcgcagtgggaggcctgcttcaacaaggtgcttttccccctg
ctgacgaagctgcttgacaacatcagcccagcagatgtgagcgggatggaggagacccgg
atgagagcctgcaccctgctgtcaaaggtgttcctccagcacctgtctcctctgctgtcc
ctgccgaccttcgccgccctctggctcaccattctggatttcatggacaagtacatgcac
gcgggatccagcgacttactgctggaggccatccccgagtccctgaagaacatgctgctg
gtgatggacacggcggggatcttccacagcgccgactccgggaccggatactcggacctg
tgggagatcacctgggagcggatcgtgtgcttcctgcctcacctgagggaggagctcttc
aagcagacggtcatcccagacccaggacccggtcctcaagcagaacccgcgcagccgtca
tcccctcgggcgtcgccgccgccggctcaggccccctccccggtgaaccctgcagagacc
cggacctccagcaggcccgcatcacccctggagccccaaccagggtccgagcgctcgtct
ccggtgccgcactcgatggcctccgtgccgctgaccacgtccccgcccatgggcccctcc
cccttgagccagtcccccctcatcctgcagcccctcgcctccccgctgcaggtgggcggc
ccccccatgccgctgcccatcatcctgaaccccgccctcatcgaggccacgtcccccgtg
cctctgctgcccgggccgacgagccctgctggcgagttcaagtaa
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