Pseudoliparis swirei (Mariana hadal snailfish): 130206821
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Entry
130206821 CDS
T09868
Symbol
epas1b
Name
(RefSeq) endothelial PAS domain-containing protein 1b isoform X1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130206821 (epas1b)
04131 Membrane trafficking [BR:
pswi04131
]
130206821 (epas1b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130206821 (epas1b)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
130206821 (epas1b)
BRITE hierarchy
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
130206821
NCBI-ProteinID:
XP_056290968
LinkDB
All DBs
Position
17:complement(21428959..21473733)
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AA seq
875 aa
AA seq
DB search
MTADKEKKSVFPRRSSSERRKEKSRDAARSRRSKETDVFYELAHQLPLPHSVTAHLDKAS
IMRLAISFLRTRKVLATGCSSSSSSGEGDGDGDDDGDGDEDGQMDSLYLKSMEGFITMVT
SDGDMIFLSDNISKFMGLTQVDLTGHSIFDFTHPCDHEEIRENLCLKTSGSGFGKKGKDL
STERDFFMRMKCTVTNRGRTVNLKSASWKVLHCTGHLQVYSSCPPPRVPCGFSEPPLTCA
VLMCEPIAHPSNNDTPLDSKTFLSRHSMDMKFTYCDDRVTELMGYTPEDLLGRSVYDFYH
ALDSDGVTKSHHNLCSKGQAVSGQYRMLAKSGGYVWVETQGSVIYNSRNAQPQCIVCINY
VLSDIEEESVILSLKQTESTPLRPSGFLSAGGGGAPFARLKEEPEELARAAGVGGRDFDR
PPFEEPPQPGGCAQVSVAAMPPPGSTSWASESLKPAPPASVPRGVANMAGGAFTVHRNPP
APPPGSATPSLSSCSTPSSPGDYYSPVELTEKLFSLDTKGSSPAHTESNLSDLDLETLAP
YIPMDGEDFQLHPIITESEPLDGGPAGSVGCNNSLAKTQQSTQPSFSNIASLFQPLSSPP
QPQGLYQHQPAAPWAAGGERGSGQGALDSRHGPYVMGHMQNHAFQALASAPLSSMGGRQN
LQWPPDPLITYQQQQQQQQQATKAYLMDPLSGEERPSWQQNAPHLVHKHSFVQAYGDMSP
ARGAMANSIKRPFTPMTVGDGTPSEGTWKKMRGDSCGAMDRRLSARSLAEMGSMTPAGMS
SRLSAAQQHRKCQYPGSGIGGATEKPFLHTSCNYTYNVQPSNKAEGVASRLLGSSFEASC
LPELTRYDCEVNVPLQGNLYLLQGCDLLRALDQAT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaggagaagaagagtgttttcccgcgcaggagcagctccgagagacgt
aaggagaagtctcgcgacgcggctcgctcccgacgcagcaaagagacggacgtgttctac
gagctcgcccaccagctgccgctgccgcacagcgtcaccgcccacctggacaaggcctcc
atcatgaggctggccatcagcttcctgcgcacgcgcaaggtgctcgccacaggctgcagc
agcagcagcagcagcggtgagggtgatggtgatggcgatgacgatggtgatggtgatgaa
gacggacagatggacagtctgtacctgaagtctatggagggcttcatcaccatggtgaca
tcggacggcgacatgatattcctgtccgacaacatcagcaaattcatggggctcacgcag
gtggacctcactggtcacagcatctttgacttcacccatccatgtgaccacgaggagata
cgagaaaacctctgcctgaagacatctggcagcggcttcggtaaaaaaggcaaagacctg
agcaccgagcgagatttcttcatgaggatgaaatgcacggtgaccaacagaggacgaacg
gtcaacctcaagtcagccagctggaaggtgctgcactgcaccggtcacctgcaggtgtac
agcagctgcccgccgccgcgcgtgccgtgcggcttctcggagcccccgctcacctgcgcc
gtcctgatgtgcgaacccatcgcccacccgtccaacaacgacacgccgctggacagcaag
accttcctgagcagacacagcatggacatgaagttcacctactgtgacgacagggtaaca
gagctgatgggctacactcctgaggacctgctgggtcgctccgtctacgacttctaccac
gcgctggactcggacggcgtcaccaagagccaccacaacttgtgttctaagggccaggcg
gtgagcggtcagtaccgcatgctggctaagagcggcggctacgtctgggtggagactcag
ggcagcgtcatctacaacagccgcaacgcccagcctcagtgcatcgtgtgcatcaactac
gtcctcagcgacatcgaggaggagtccgtgatcttgtccctgaagcagacggagtccacg
ccgctccgcccgagcggcttcctcagcgcgggaggaggaggagctccgttcgcccgactc
aaggaggagccggaggagctcgccagggccgccggcgtcgggggccgggacttcgatcgc
cctccgttcgaggagcccccgcagcccggaggatgcgcccaggtgtccgtggcggcgatg
cctcctccgggatccacttcctgggccagcgagagcctcaagcccgcccctccggcttca
gtcccgaggggcgtggccaacatggccggcggtgcgttcactgtgcatcggaatcctccg
gcgccgccgccgggcagcgccactccgagcctcagcagctgctccacgcccagcagccca
ggtgactactacagcccggtggagctgactgagaagctgttttctctggacacgaaggga
agcagtcctgcacacacggagagcaacttgagtgacttagacctggagactttggctccc
tacatcccgatggacggcgaggacttccagctgcatcccatcatcacagagtccgagccc
ctggacgggggtccggcaggatccgttgggtgcaacaacagcctggccaagacccaacag
tccacccagccgagcttcagcaacatcgccagcctcttccagcccctgtcctcccctcct
cagccccaaggcctctaccagcaccagccggctgcgccctgggccgcggggggggagaga
ggctccggccagggcgccctggactcccgtcacgggccttacgtaatggggcacatgcag
aatcatgcgttccaggctctagccagcgcccctctgtcctccatgggtggcaggcagaat
ctgcagtggccacctgaccctctgataacgtaccagcaacaacaacaacaacaacaacaa
gccaccaaggcgtacctgatggaccctttgtctggagaggagcgcccgtcctggcaacag
aacgcgcctcacctcgtgcacaaacacagctttgtgcaagcctacggagacatgagtcca
gccagaggggccatggccaacagcatcaagcgccccttcactccgatgactgtgggcgac
ggcacgccttcagaaggcacatggaagaagatgaggggggacagctgtggcgccatggac
cgccgcctcagcgccagatcactggcagagatgggctcgatgacgcccgccggcatgtct
tcacgtctcagcgccgcgcagcaacacaggaagtgtcagtatccaggaagcgggataggc
ggcgcaaccgagaaacccttcctccacacgagctgcaactacacgtacaacgtgcagccg
tcgaacaaggccgagggcgtcgccagccgcctgctgggctcttcgtttgaggcctcctgt
ctgccggagttgacccgctacgactgcgaggtcaacgtcccgctgcagggcaacctgtac
ctcctccagggctgcgacctgctgagagccctggaccaggccacctag
DBGET
integrated database retrieval system
