Pseudoliparis swirei (Mariana hadal snailfish): 130207081
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Entry
130207081 CDS
T09868
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207081
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
Others
130207081
BRITE hierarchy
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
AIF-1
Motif
Other DBs
NCBI-GeneID:
130207081
NCBI-ProteinID:
XP_056291474
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All DBs
Position
17:20272458..20321450
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AA seq
1253 aa
AA seq
DB search
METRLGHWLLIIFSKWIWLFTLTSIPGGTKAELLCIPSCQQPLIKALPRELSELDLANFG
EAPTKDLVGFTDWSPGAKPADGADEKHNVAELTASEESSSEVPPRLEGNNASCLEKDASK
DRHKLSGSKVSPGSASSPAAALSPGEGNETENRTGDGEDNTDENGAQFDVTVGLDEETDV
AGWRRTRRARSAETWSGFRPEDGEDASVSDQEEFELSSSTFALTGDTAHNQAMVHWSGQN
SSVILMLTKYYDFNSGRVTESSLWRSTDYGTTYEKLNEKVGPKTILSYLYVSPNNKRKIM
LLTDPEVESSLLISLDEGATYQKHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGK
RWQLVHDGVIPNRFYWSRMGLDKEQGMIHLEISVSDGRSQYITCKLQNCSDGNKAKPFPG
FIIPNSLVVQDEYVFIQVPVGGQSVHYVSYKRNAFYPMKLPKYTLPKDLQIISTDDNQVV
AAIQDWHQNDSYNLYMSESRGLFFTLMLENAVSSRGPEGNVMIDLYEVAGIKGVFLSNKV
VENQVKTYITYNKGRNWRLLQAPTTDLQGNQVFCEQPSCSLHLHLHVSENPYTSGNIVSK
DSAPGVIIASGVVGPELTSNNVSIFITSDAGNSWREVFQEEYSVFFLNQGGSLVAIRHTP
LPIRHIWLSFDEGRNWDKYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKTD
FRSIFQHRCTSADYMTWQLHNEGDVCIMGMKRMFQKLKANVLCVKARNQYISQMSDSCPC
TEADFECDYGFIRQIDGSCAPAFWFVPTPTSRDCITGDSFLNTTGYRRALSNNCTEGTLL
KYSPRRQKCPTQAPRGLQLFTSDGTLVATLEKNVTFLIFLEEGLGSMTSITVDFGDGTAI
SYVNISSIDDGVKHIYSKVGIYQVSATATNALGSDRVILYLHVSCQLEQVHLSAPSVIVK
NKAVSLTTVLRPSNVGTVSYYWWFNNKTEPVVTLVGVKSFTFSEEGSHTVTVQAAVGNIV
HEDQITLAVYDYFWSHVLAFSSNLDELNPGVSEWREDIGRVVKSNMVQVTGINEEQLLVT
VLPGLPTTAEIFIVPEKKPRDGGMDEKWAHLDQLSQVLLSALNQDLIQFTLKPGVQVNVY
ATQLSPAPLVDSSDSGHSGTAVIMLVSVVLMSLAVFVIYKFKRKIPGINTYTAEQPDKEQ
EVIPTVTSIDVPNPEGDKLTSLDHVDVQLDSKGRGYLPSHTAIKLSDEAPRVF
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcctcggtcactggcttttgatcattttctcgaagtggatttggctcttc
accctaacttccatcccgggcggaacgaaagcggagctactgtgcattccttcgtgccag
cagccgcttattaaagctcttccccgggagctctcggagctggatttggctaattttggc
gaggcaccaactaaagatctcgttggatttacagattggtcaccgggcgccaaacccgcc
gacggcgcagacgaaaagcacaacgttgcagaattaacggcgagtgaagaaagttcgtcc
gaagtgcctccgcggttggagggaaataacgcaagttgtctggagaaggacgcgtcgaaa
gatcggcacaaactttccggctcgaaagtgtctcctggaagtgcttcttcacccgcggcg
gctctttctcccggtgagggtaacgagaccgaaaatcggaccggtgatggagaagataac
accgatgaaaacggggcgcagtttgatgtgacagtgggcctcgacgaggagacggatgtg
gccggttggagacgaacgcgtcgcgcgaggagcgcggagacgtggtccggattcagaccc
gaggacggggaggacgcttcggtttcagaccaggaggagtttgagctctcaagttcaaca
ttcgcgctcaccggggacactgctcataaccaggccatggtgcactggtccggacaaaac
agcagcgtaatcctcatgttgacaaagtactatgacttcaactctggcagagtaacagag
agttctttatggaggtcaactgattacgggaccacatatgagaagcttaatgagaaagtc
gggccaaaaaccatcctgagctacttgtacgtgagtccaaacaacaaaaggaagatcatg
ttgctgaccgacccggaggtggagagcagcctgctcattagccttgatgagggggcgacc
tatcagaagcacagcttagcctttgatatcctcagcctgctttttcaccccgagcaggag
gactggatcctggcttacagccacgaccaaaagctctatgtctctgttgaatttgggaag
agatggcagctcgtgcacgacggcgtcatccccaacagattctactggtccagaatgggt
ttagacaaagagcaaggaatgattcacctggagatcagcgtctctgatggacggtcacag
tacatcacttgtaaacttcagaattgctctgatggcaacaaggccaagcctttccctgga
tttatcatccctaattccctggtggttcaggatgaatatgttttcatccaggtgccggta
ggtggtcagtcggtccattatgtgtcctataaaagaaacgctttctacccaatgaagctt
cccaagtacactcttccaaaggacttacagataatcagcacagacgacaaccaagtcgtg
gcagcgattcaggactggcaccagaatgactcctacaacctgtacatgtctgagtccaga
gggctgttcttcaccttgatgctggagaacgctgtgagcagcagaggaccggagggcaac
gtcatgattgacctctatgaggttgccgggattaaaggggtgttcctgtcaaataaagtt
gttgagaaccaagtgaaaacttatatcacatacaacaaggggagaaactggcgtcttctt
caggctccaacaaccgatctccagggaaaccaggtcttttgtgaacaaccttcctgttcg
ttacatctacacctccatgtgtcagagaatccttacacctcgggaaacatcgtcagcaaa
gattcagctccgggggttataatagcgtcaggtgttgttggacctgagctgaccagtaac
aatgtcagtattttcatcacgtctgatgctggaaacagctggagagaggttttccaggaa
gagtacagcgtgtttttcctgaatcaaggaggatctctggtggccatccgacatacacct
cttccaattagacacatttggctgagttttgatgaaggcagaaactgggacaaatacagc
ttcacctcctccccgctctatgtcgatggggtgctgggagagcctggagaggacaccctc
atcatgacaatattcggtcatttcagtcatcgatctgagtggcaacttgtcaaaactgac
ttccggtccatttttcaacatcgctgcacatctgcagattacatgacatggcagttacac
aatgagggcgatgtgtgcatcatgggaatgaagagaatgttccaaaaactgaaagcaaac
gttctatgtgtcaaggcaagaaatcaatacatttcccaaatgtcagattcctgcccgtgc
acagaggcagactttgagtgtgactatgggtttataaggcagattgatgggagctgcgct
ccggctttctggtttgttcctacaccaacatccagagactgcatcactggggacagcttc
ctcaacaccacgggatatcgccgggctttgtcaaacaactgcactgagggaacactgttg
aaatacagccccaggcgacaaaagtgtcccactcaggcccccaggggcctccaactcttc
accagtgatgggacactggtagcaaccctggagaagaatgtcaccttcttgatctttctg
gaagagggtctcggctccatgacgagtataacggtggactttggcgacggcacagcgata
tcgtacgtgaacataagctccatcgatgacggggtcaagcatatctacagtaaagttggc
atctaccaggtttctgcaacagcgaccaacgctctgggctctgatagggtgatactctat
ctccacgtctcctgtcaacttgaacaggtccatctctcggctccttccgtgatcgtcaag
aacaaagcggtcagcctcaccacggtgttacggcccagcaatgtgggaacagtcagctat
tactggtggtttaacaacaaaacagagcccgttgtcacgctggtcggagtgaagtccttc
accttctccgaggagggaagtcacaccgtcaccgttcaggctgcagttggcaatattgtc
cacgaggaccaaattactttggctgtttatgattatttttggtcccacgttttggccttt
tcttctaatttggacgagctgaaccccggcgtgtccgagtggagagaggacatcggccga
gtggtaaagagcaacatggttcaggtcacagggataaacgaggagcagctcctggtcacg
gtgctcccaggtttaccaacaaccgcagagattttcatcgttccggaaaagaagccgaga
gacgggggcatggatgaaaagtgggcgcacctggatcagctttctcaggttctgctcagt
gctttgaaccaagacctcatccagttcacactcaaaccgggggtgcaggtgaacgtgtac
gccacgcagctgtctccagctcctcttgtggacagcagtgacagtggccacagcggaact
gcggtcatcatgctcgtgtcagtcgtactgatgagcttggctgtctttgtaatatataaa
ttcaaaaggaagatcccgggcatcaacacatacacggcagagcagcctgacaaagaacaa
gaggtcatcccgacagtgacctccatagacgtcccaaaccctgagggggacaagctaacc
tcactggatcatgtggatgtacagttggactcaaaaggcagaggctacctgccatctcac
actgccatcaagctctcggatgaagcgccccgtgtgttttaa
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