Pseudoliparis swirei (Mariana hadal snailfish): 130207971
Help
Entry
130207971 CDS
T09868
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207971 (tmf1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130207971 (tmf1)
BRITE hierarchy
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
130207971
NCBI-ProteinID:
XP_056292761
LinkDB
All DBs
Position
18:26847016..26858878
Genome browser
AA seq
1137 aa
AA seq
DB search
MSWFNASLSSFAKQALTTAQKSIDRVLDIKEEDQWGNTVVLPFDDVTIPGKLSLSGGWGM
TQWEAPPEEKTASPPPSSEAITTPVTRTVVDESENFFTGFLPPGDVQGVADAQVVSVPPA
KSQRTPREKGKDTGEEAEAPMPAPADEGLGNQTVAERQPESPNLDAVLLQPFFPSPPGDP
DSDESCETPDAGSADANAEPSQTPSDRQIEPDPADSPPEPAAVAPEPESAAPRDPSPSPP
SREVLVEPKDSKGEDRQSDTPSPPVSASSSGTSTTSDIEVLDHESVLSESSASSRQETGE
GKAGLHLMQGSFQLLTASTCEDFPRLDDYSKLTESCGSSSDAFERIDSFSVQSLDSRSVS
EVNSDDDVPGSRTLASVTAGPPPSAVCQKQEDGVVENEGEEEEEEEEEEEGFTETTREQS
PDEMEESGRSATPVNSEPPEELTERESEAHVTLSGPASFAEERISPPITEEMKSVSTVQI
LELRKVIDELSGRLEKRESQLLAVSKDKARLEEKCDNLKDEVISLKEESSAVQSLKDEFT
QRIADAERKAQLACKERDIAKKEIKGLQEELSTRLHSSDTLEIIREKEEQIKGLLEEGEK
LSKQQLQHGNIIKKLRVKEKESDTRVARQQRRIKEQEEELQQLQQILDGKEEVEKQHREN
IKKLNAVVERQEKELSRLQTDSEELQEKNRSVQAALDSSYKELAVLHKAHVSRTSEAEEA
SLSRQTQAKEQLSVALEKAQEEARLQQEALANQVADLRVALQRAEQQQARKEDYLREEIK
ELQQRLQEADTRNQELSQSVTAATRPLLRQIENLQASMGGQTASWEKLEENISDRLADAQ
AQLAVAVEKERSATEDLLSIKSQLVSLEAQNSLLRQEKARLLAQVDAEKSKREKLEDESS
REHVDLENLRGEHVRLLEEAKKEKLLLNNQLEMVKMKVEQEKKKCYLAHEALKEKERRTM
TRSVGEPPASSTPSLSRSSSISGADNAGLHTSLLSQDDYSDHSLGTMTMSMSMSGTNLYE
AARLSGGSSILENLQSQLKLREGEITQLQFEISSLERSRSVMAEELVRLTNQNDEMDEMV
QEIPTLKVQLMELEQRHNTILQMYGEKAEEAEELRLDLEDVKNMFKTQIDELLKNQK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctctgtccagcttcgccaaacaagctttaaccacagctcag
aagtcaatcgaccgagttctggacatcaaagaagaggaccagtggggtaacaccgttgta
ctgcccttcgacgacgtcacaatacctgggaagctgtctctgagcggaggatggggaatg
acgcagtgggaagcgccccctgaggagaagaccgcctcgcctcctccatcctccgaggcc
atcaccacgcccgtcacccgcacggtcgtggacgaatccgagaactttttcaccggcttt
ctgcctcccggagacgtgcaaggtgtcgccgacgcccaggtggtgtccgtgccccctgct
aagtctcagaggacgcctcgggagaaggggaaggacaccggcgaagaagcggaggctccg
atgccggcgcctgctgacgagggtctcgggaatcagacggtcgctgagaggcagcccgag
tcgcccaatttagacgctgtcctcctgcagccgtttttcccatctcctcccggcgacccc
gacagcgacgagagctgtgaaaccccagacgctggctctgccgacgcaaacgcggagccc
tcgcagactccgtcagaccggcagattgagccggatcccgcggattcaccgccagaaccc
gccgctgtcgctcctgaacccgagagcgccgcacctcgcgatccttcgccctccccgccc
tctcgggaagtcctcgtcgagccgaaagactcaaagggggaggaccgccaaagcgatacc
ccctctccgccggtcagcgcttcctcctcgggaacctccaccacgagtgacatcgaagtg
ctcgaccacgagtccgtgttgagcgagagctccgccagctccaggcaagaaacgggggag
ggcaaggctggcctccacctcatgcagggctccttccagcttctcaccgcctccacctgc
gaagatttcccccgtctggacgactattccaagctcacggagagctgcggctcgtcttcg
gacgcgttcgaacgcatcgactcgttcagcgtgcagtcgctggacagccggagcgtcagt
gaggtgaactcggacgacgacgtccccggcagtcggacgctcgcgtctgtcactgcggga
ccgcctccttcagcggtctgccagaagcaggaggatggcgtggtggagaatgaaggcgag
gaggaggaggaagaagaagaagaagaagagggcttcactgaaaccacgagggagcagtcg
ccggatgagatggaggagagcggacggagcgcgacgcccgtcaacagcgagccgccggag
gagttgacggaacgggaatctgaggctcacgtcacgctctctgggcccgcctcctttgcc
gaggagcggatctctccgccaatcacagaagagatgaagagcgtctccacggttcagatt
ctggagcttcgaaaggtcattgacgagctgtcaggccgccttgagaaaagagagtctcag
ctgctggcggtcagcaaagacaaagccagactggaggagaagtgtgacaatctcaaagat
gaagtgatcagcctgaaagaggagagctccgctgtccagtccctcaaggatgagttcacg
cagcgcatagcggatgcagagaggaaggctcagctggcatgcaaagaacgagacatcgcc
aagaaggaaataaaaggcctgcaagaagagctttcgacgagacttcactccagtgatacg
ctggagatcatcagagagaaggaagagcagatcaaaggcctgctggaagaaggcgaaaag
ttgtcaaagcagcagctgcagcacggcaacatcatcaagaagctgcgcgtgaaggagaag
gagagcgacacgagggtcgcccggcaacagaggagaatcaaggagcaggaggaggagctg
cagcagctgcagcagattctagatgggaaagaagaggtggagaaacagcaccgggagaac
atcaagaagctgaacgcggtggtggagcggcaggagaaggagctgagccggctgcagaca
gactccgaggagctgcaggagaagaacaggagcgtccaggctgctctggacagctcctac
aaggagctggcggtgcttcacaaggctcacgtcagcaggacgagcgaggcggaggaggcg
tccctgagccggcaaacgcaggccaaggagcagctgagcgtggctctggagaaggcccag
gaggaggcgcggctgcaacaagaggcgctggccaatcaggtggctgacctgagggtggcc
ctgcagagggctgagcaacagcaagcaagaaaagaggattatttgagggaggagatcaag
gagctgcagcagaggcttcaggaggcggatacgaggaaccaggagctcagtcagagcgtt
accgcggcaacacgacccctactgcgacagattgagaacttgcaggcctcaatgggcgga
cagacggcatcctgggagaaactggaggagaacatttcagacaggctggccgatgcccag
gcgcagctggcggtcgccgtggagaaggagcgatcggccaccgaagacctcctgtccatc
aagtcccagctggtctctctcgaggcccagaactccctgttgcgccaggagaaggcccga
ctcctggctcaggtggatgctgagaagagcaagcgagagaaactcgaggacgagagcagc
agggagcacgttgatttggagaatctgcgaggagaacacgtccgcttgctagaagaggcc
aagaaggaaaagctgctgctaaacaatcaattagagatggtgaagatgaaggtggagcaa
gagaagaagaaatgctacctggcacacgaggcactcaaggaaaaggagcggaggaccatg
acccgctctgtcggggagcctccagcctcctccacaccatcgctgtcccgctcgagctcc
atcagtggggcagacaatgctggtctgcacacctctcttctctcacaggatgactattcg
gaccactctctgggtaccatgaccatgtcgatgtcgatgagcgggaccaacctctacgag
gccgcccggctgtccggaggctccagcatcctggagaacctccagtctcagctcaagctc
cgagaaggggagataacacaactgcagtttgagatctccagtctggagaggagtcgttcc
gtgatggcggaggagctggtcagactcaccaatcagaacgatgagatggacgagatggtg
caggagatccccacgttgaaagttcaactcatggaactggagcagaggcacaacactatc
ctgcagatgtatggagaaaaggctgaagaggcagaggagctgcgattggacctcgaagat
gtgaagaacatgttcaaaacccagattgatgaattgctgaagaaccagaaataa
DBGET
integrated database retrieval system
