Pseudoliparis swirei (Mariana hadal snailfish): 130209082
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Entry
130209082 CDS
T09868
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130209082
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209082
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130209082
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130209082
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130209082
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
130209082
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130209082
NCBI-ProteinID:
XP_056294605
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Position
18:complement(28209496..28229776)
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AA seq
537 aa
AA seq
DB search
MKLACTRRNAESETRVTVKFVHATRVLGPVKSASLSPTCLPTRCSLCARVGWSRLSACVW
HVGRLTTRARRREKGFKSRSIVSRACSGLSRVAPGSDLFDVSSGLVVTRPGVMDSADVST
STVAPDEFDRNVPRICGVCDDKATGFHFNAMTCEGCKGFFRRSMKRKAAFTCPFSGTCAI
TKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKDEEVQREADKEARRPRL
SDDQSQVIATLVEAHHKTYDDSYSDFCRFRPPVREGPVTRSASRAASLHSLSDASSDSFS
HSPESVDNKMNFNNLLMMYHEQGSSPDSSKEEACSFSMLPHLADLVSYSIQKVIGFAKMI
PGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPDFKYQVSDVTKAGHSLE
LLEPLVKFQVGLKKLNLQEEEHVLLMAICLLSPDRPGVQDHARIEVLQDQLSETLQAFIT
LHHPAGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQQEHSLQLTPLVLEVFGSEVS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcgtgcacgcggaggaatgctgaaagcgaaactcgggttactgtcaaattc
gtccacgcgactcgcgtgctcggccccgtgaaaagtgcgtcgttgtcaccaacgtgttta
cccactcgctgctcgctctgtgcgcgtgtgggatggtcacgcctgagcgcgtgcgtgtgg
cacgttggaagattaacaactcgggctagacgaagggaaaaaggtttcaagtctcgctcc
attgtttccagggcatgctcaggcctcagtcgggtcgctcccggatctgatttgtttgac
gtctcctctggactcgtcgtgacccggcctggagtgatggactctgccgacgtgagcacg
tccaccgtggcgcccgatgagttcgacaggaacgtgccgcggatctgcggcgtgtgcgac
gacaaagccaccggcttccacttcaacgccatgacctgcgagggctgcaagggcttcttc
aggcgcagcatgaagcgcaaggcggccttcacgtgtcccttcagcggcacgtgcgccatc
accaaggacaaccggcgccactgccaggcctgccgcctcaaacgctgcgtggacatcggc
atgatgaaagagttcattctgacagacgaggaagtgcagaggaagaaggacctgattcag
cggaggaaggacgaggaggtgcagcgcgaggcggacaaggaggcgcggcgtccgcggctc
agcgacgaccagagtcaggtgatcgccacgctggtggaggcgcaccacaagacctacgac
gactcctactccgacttctgccgcttcaggcctccggtgcgcgagggtccggtgacgcgc
agcgccagccgagcggcctcgctccactcgctgtccgacgcctcctccgactccttcagc
cactctccagagtcggtggacaacaagatgaacttcaacaacctgctgatgatgtaccac
gagcaaggcagcagccccgactccagcaaggaggaggcctgcagcttctccatgctgccc
cacctggccgacctggtgtcctacagcatccagaaggtcatcggcttcgccaagatgatc
cctggcttcagggagctgactgcagaggaccagatcgctctgctcaagtccagcgccatc
gaggtgatcatgctgcgctccaaccagagcttcagcctggaggacatgtcctggagctgc
ggggggccggacttcaaataccaggtcagcgacgtcaccaaagcgggccactctctggag
ctgctggagcctctggtgaagttccaggtgggcttgaagaagctgaacctgcaggaggag
gagcacgtgctgctgatggccatctgcctgctgtctccagaccgccccggtgtgcaggac
cacgcccggatcgaggtcctgcaggaccagctgtccgagaccctgcaggccttcatcacg
ctgcaccacccggccgggcggctgctctacgccaagatgatccagaagctggccgacctg
cgcagcctcaacgaggagcactccaagcagtaccgctcgctctccttccagcaggagcac
agcctgcagctcacgccgctggtgctggaggtgttcgggagcgaggtctcctag
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