Pseudoliparis swirei (Mariana hadal snailfish): 130212738
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Entry
130212738 CDS
T09868
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130212738 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130212738 (rsf1b.1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
130212738 (rsf1b.1)
BRITE hierarchy
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Pap_E4
Motif
Other DBs
NCBI-GeneID:
130212738
NCBI-ProteinID:
XP_056299880
LinkDB
All DBs
Position
3:complement(24450051..24470770)
Genome browser
AA seq
1653 aa
AA seq
DB search
MAASAATASSSPSLCPNYAAICSFLERYGALLDLPELTFPQLERYLRDTSAVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKICQDLNTTWAWELEQSGYKELSLERKTGILKYLCECQF
DENVKFKTAVNDEEPDKMRLQPIGRDKDGQMYWFQLDQEDNVRVYLEEQDDVDGSSWKCI
VRERNDLAEVLALLKTQIDPELLKKDQENKPEGEVKKVEDTSDEDCKDSTKAVAPKTENL
ENPENLTQKEDLKSEPSDAKSSLNGVAEGGSEAELHSEKSAVDLDIGDKAQSIKEEPMEE
TDAGTTTITTTTTTAGQPVSETPRLPVKAEQREEAKKSTADGIQQALNDQQAKIPLKKRG
MKFTEDFEKKSGFVAQNPAAAVVNVNGEAPPAEGKRGEEAMGKREEEKNKEGSGKNNPDP
ESAPPKEKAEPPTGPPLLPKDANNAAEKPSDHEERERIKETAKESKKTGEPVKVKAKNVE
STVAPRAAEKSPANGTPGVIKPTPCEDRGAAKKPDDLPSVIKKTDALKDADGALIKVSEV
IKVSEVIRKADGPFVCERSGRENVGSSVIKKLDASCKSAEKNDDTEEAEPSKKTVACEDR
AVRHVSKMAAPGPVEAAKLYPKPRGDDKAETSVAKRKEEASGGSDNSSRASKESDKTTDR
PDQETERTERPSSESKKDTDIGKKKDTDKDTSTDQKKDTDIGKKKDTDKETSTGQKKDTD
IGKKKDTDKDTCTGQKKDTDKETSTDQKKDTDIGKKKDTDKDTCTGQKKDTDKETSTGQK
KDTDVGQKKDTDKDTSTDQKKDTDIGQKKDTGEETKKDTDEEMKKDTGEETKKDTDEEMK
KDTDEETKKDTDVGKQRNQKLCQKNKPPETKGNKRAHKETESLTKSSTEALKDGKKPAGE
DEDSVAPKEVANGDDALTSRRLIRPRGHRRKVRLQREERPADSESDANTGRSLRRSPRIS
RPTAKAVEIHDRKLERTHGEEKEESEGEKEKEEDKEEEEEVKAVQKKPREKKVDQEGQPK
PKGRKRRRVRWSNTRTRRKKKGSEDDGSDGESSEEEDEEESEDDSDEDYKVERSKKRRSR
HRERRSSDSATSTDDDLPPNDDPCKHCGLPNQPELILLCDSCDNGYHTACLRPPLMIIPD
GEWYCPPCQHKLLCDKLEEQLTNLDAALKKKERAERRKERLIYVGISLENIIEPSGEVEE
VEEEEKPEIIIKEEKKRRGSWGRRSTRTKKSISYRFDEFDEAIEEAIEEDLKEAEGGGAG
RGKDMANITGHRGKDMSTILQADEGKEDAPPPRPAPVGPRRKKRRRLNDLDSDSTTEEEE
SEDEFRVSESSEEEFVVSENETDGESESNSEAGGGAKRRGKPLKRRRSVRKRRRPRGYSD
DEEEETDEEDEEEIVTEGSSGYSDSDLDVSRRRSRRSQKKQVNYHETSESDGSRKESNRP
RMRPKARPDSSDSSESSSRGSEEESRHRRVKRRADSSEEEEKEEGSRQRRRRLALKRRRT
SERDDSDDSSDDSSEEDRPVRKRVNRIDSDDSEEEEEKQKEGGKEEEEEGKEEAKQQEEE
PKEEETKEKKTAEKADEESKGTAPVGGAPVGGAPTEPTPTNRKSPAAKGLEGGAKNTGAN
GQAGPEAAPQEEDEDDLLGVTDLVDYVCNNEDL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggcgagttcttcccccagcctgtgtccgaattacgccgcg
atctgctcctttctggagcggtacggagcgctgctggacctgccggagctcaccttcccc
cagctggagcgatacctccgggacacgtcggcagtgccgaagctgctcgtcgatcttcac
gtgaagctgctgaggaagatcggaaagtctgtgtctgccgaccggtgggagaaatacctg
gtgaagatctgccaggacttgaacacaacgtgggcgtgggagctggagcagagcggctac
aaggagctgtctctggagaggaagacgggcatcctgaagtatttgtgtgagtgtcagttt
gatgaaaatgtcaagttcaaaaccgccgtcaatgacgaggaaccggacaagatgcgcctg
cagccgattggccgcgacaaagacggccagatgtactggttccagctggaccaggaggac
aacgtgcgggtctacctggaggagcaggacgacgtggacgggtcctcctggaagtgcatc
gtcagagagaggaacgacctggccgaggttctggctctgctgaagacacaaatcgacccc
gagctgctaaaaaaagatcaagaaaacaaacctgaaggtgaagtgaaaaaggttgaggat
acctcggatgaagactgcaaagactccaccaaggccgtcgccccgaagacggagaacctg
gagaacccggagaacctgacgcagaaagaggacctgaagtcagaaccttccgacgccaag
tcgtccctgaacggcgtcgccgagggaggaagtgaagccgagctccactcggagaagtct
gcggtggatctggacatcggagataaagcccagagcatcaaagaggagccgatggaggag
acggacgccggaaccacgacgatcaccacgacgaccacaacggccggccaacccgtctcc
gagacgccgcgcttaccggtgaaggctgagcaacgagaggaggccaagaagagcacggcg
gacgggatccaacaggctctgaacgaccagcaggccaagatccccctgaagaaacggggg
atgaagttcactgaagactttgagaagaagagcggcttcgtggcacagaacccggcggcg
gcggttgtgaacgtgaatggagaagctccaccagctgaaggaaagagaggcgaggaagca
atggggaaaagagaggaagagaagaacaaagaaggctcgggcaaaaataatccagatccg
gaaagcgctccaccaaaagagaaggcggagcctccaacaggaccgccccttttaccgaaa
gacgcgaataacgcggcggagaagccgtccgatcacgaagagcgagaaagaataaaagaa
actgcaaaagagtcaaagaaaaccggagagccggtgaaggtcaaagccaaaaatgtcgag
tcgacagtggcgccgcgcgccgcggagaagtccccggctaacggaacgccgggcgtcatc
aaaccgacgccgtgcgaagacagaggcgccgcaaagaaacctgacgacctgccgtccgtc
atcaagaagacggacgctctgaaagacgctgacggtgcgctcatcaaggtcagcgaggtc
atcaaggtcagcgaggtcatcagaaaggcagacggaccgttcgtctgtgagcgatccgga
cgagagaacgtcgggtcttctgtcattaagaagctagacgcgtcgtgtaaatctgccgag
aagaacgatgacaccgaagaggcggagccaagtaagaagacggtggcctgtgaggaccga
gcggtgcgtcatgtttccaagatggctgcacccggaccggtggaggccgccaaactctat
ccaaagcctcgaggagacgacaaggcagagacctcagtggcaaaaaggaaagaggaagct
tctggaggatctgataactcatccagggcctccaaagaaagtgataaaacaaccgacaga
ccagaccaggaaacagaaagaacagaacgcccgtcatcagagagtaaaaaggacacagac
attggaaagaaaaaggacacagacaaggacacatctactgaccagaagaaggacacagac
attggaaagaaaaaggacacagacaaggaaacatcaactggccagaaaaaggacacggac
attggaaagaaaaaggacacagacaaggacacatgcactggccagaaaaaggacacagac
aaggaaacatctactgaccagaagaaggacacggacattggaaagaaaaaggacacagac
aaggacacatgcactggccagaaaaaggacacagacaaggaaacatccactggccagaag
aaggacacagacgttgggcagaaaaaggacacagacaaggacacatctactgaccagaaa
aaggacacagacattggacagaaaaaggacacaggtgaggaaacgaaaaaggacacagat
gaggaaatgaaaaaggacacaggtgaggaaacgaaaaaggacacagatgaggaaatgaaa
aaggacacagacgaggaaacgaaaaaggacacagacgttggaaaacaaaggaatcagaaa
ctgtgtcagaagaataaacctccagaaacaaaagggaacaaacgcgctcacaaagaaact
gaatctttgaccaaatcctcaaccgaagcgttgaaagacggcaaaaagcccgccggcgag
gacgaggactctgtagccccgaaagaggtggcgaacggcgacgacgctctgacttcccgt
cgcctcatccggccccggggccaccggaggaaggtccggctccagagagaagagagaccg
gcggactcagagtccgacgccaacacggggaggtctctccggagatcgccgaggatctcc
agacccacggcgaaggcggtggagatccacgaccggaagctggagaggacgcacggcgaa
gagaaggaggagagcgagggggaaaaggaaaaagaggaggacaaggaggaggaagaggag
gtgaaagctgttcagaagaaaccgagagagaaaaaggtggatcaggagggtcagcccaaa
ccgaaggggaggaagaggaggagggtccggtggtccaacacgaggacgcgccgcaaaaag
aaaggctccgaagacgacggcagcgacggggagtccagcgaggaggaggacgaggaggag
agcgaggacgacagcgacgaagactacaaggtggagcggagcaagaagaggcggagtcgc
caccgagaaagacgaagctcggactcggcgacgtccacggacgacgacctgccgcccaac
gacgacccctgtaaacactgcggtctccccaaccaacccgagctgatcttgctgtgtgac
tcctgtgacaacgggtaccacaccgcctgcctgaggccgccgctcatgatcatccccgat
ggagagtggtactgcccgccctgtcaacacaaactgctctgcgacaaattagaagagcag
ctcacgaacctcgacgctgctttgaagaagaaggaacgggccgagagaaggaaagagcgt
ctcatctatgtcggcatcagcctggagaacatcatcgagccctcgggggaggtggaggag
gtggaggaggaggagaagcccgagatcatcatcaaggaggagaagaagcggagagggagc
tggggtcgaaggtcaacgaggacgaagaagtccatcagctacagatttgatgaattcgac
gaggccatcgaggaggcgatcgaggaagacctcaaagaagcggagggcggaggagccggg
cggggcaaagacatggccaacatcacgggccaccgagggaaggacatgtccaccatcctg
caggcggacgagggcaaagaggacgcccccccgcctcgccccgcccccgtcggcccgcgc
aggaagaagcgccggcggctgaacgacctggacagcgacagcacgacggaggaggaggag
agcgaggacgagttccgcgtcagcgagagctcggaggaagagttcgtcgtgtcggagaac
gagacggacggcgagtcggagtccaacagcgaggcgggcggcggcgccaagcggcgcggg
aagccgctgaaacggcggcgcagcgtcaggaagaggcggaggccgagaggatactcggac
gacgaagaggaggaaacggacgaggaggacgaggaagaaatagtgaccgaaggctccagc
ggctacagcgacagcgacctggatgtgagtcgccggcggtctcggcggagtcagaagaag
caggtcaactaccacgagacctccgagtccgacggctcccgcaaggagagcaaccggccc
aggatgaggcccaaagcccggccggacagctcggacagctcggagagttcctccagaggc
tcggaggaggagtcgcggcatcggagggtgaagaggagagccgactcctcggaggaagag
gagaaggaggaaggctcccggcagcggcgccggcggctcgctctgaagcgccggagaacc
tccgaacgcgacgactcggacgactcgtcggacgactcgtcggaggaggaccgcccggtc
cgcaaacgggtgaaccgcatcgactccgacgacagcgaggaggaggaggagaaacagaag
gagggggggaaagaggaggaagaggaagggaaagaggaggcgaagcagcaggaggaagaa
ccaaaggaggaggaaacgaaagagaagaaaacggctgaaaaagcagacgaggagtcaaag
gggacagccccggtgggcggagccccggtgggcggagccccgacggagccgacgcccacc
aacagaaagagcccggcagcgaagggcctggagggcggagccaagaacacgggcgccaac
gggcaggccggcccggaggcggcgccgcaggaggaagacgaagacgacctgctgggggtc
accgacctcgtggattacgtctgcaataacgaagatttgtaa
DBGET
integrated database retrieval system
