Pseudoliparis swirei (Mariana hadal snailfish): 130213305
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Entry
130213305 CDS
T09868
Symbol
si:dkey-33i11.1
Name
(RefSeq) sialoadhesin
KO
K06467
CD22 antigen
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130213305 (si:dkey-33i11.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130213305 (si:dkey-33i11.1)
04091 Lectins [BR:
pswi04091
]
130213305 (si:dkey-33i11.1)
CD molecules [BR:
pswi04090
]
Proteins
130213305 (si:dkey-33i11.1)
Lectins [BR:
pswi04091
]
I-type lectins (Siglecs)
130213305 (si:dkey-33i11.1)
BRITE hierarchy
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
130213305
NCBI-ProteinID:
XP_056300771
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All DBs
Position
22:complement(22380915..22421742)
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AA seq
642 aa
AA seq
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MLAGALVLGIVLTALPGIQSGWSASFSRREICVWAGTTVTLPCRYDYPSGHTVTRVMWFR
VSAEGRRAFAHHTDPNEISLSYRGRTRYIGGSYSSCSVQIRQVGLSDAGQYHFRFETDQP
LGRWTSPSTIALDVTDLQVQVQPARPAHMMVSGETVFVGCRARGCAAPGRSLALYRSGQN
LGSFDTWMTIAGFAERHTGAYACRPVPPQNVQSPAVWLALGHGPSSTSIAVSPVGEVSEG
GSVTLTCRSDAAPPVESFVWFKDMASDSIPDSFRPQLRLSHLKYTDRGEYFCVARNALGT
ERSRPLLLNVTYSPKNTRVLLMPPADIREGSSVTMSCESRAHPPASRYAWYRILGDQVLS
RGTSPSVAFPSVRAHHAGQYFCEAGNRFGSQRSPTATLTILYPPKNTSLLARPSSVVDAG
RPLTLTCSSQANPAVDNFTWHRLPLDGGSVQSWGGKARPVFTFLEVGPGESGQYYCEARN
RIGAHSSPVLTVRVRGRLKVIALASAVGVSAGLITLTVAIMISKNMHKVDTEAADNKRPS
VDDDTLFFESTQQNFPVRMMSDIPEEPEDLSDSAHPAIVPLKDAPPITAVETHSPASNYL
AVHNSKLSSVDQVQVHNLPLGGDRNPTDSSGVVYTLLQQPRL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaggtgcgttggttctgggcatcgtcctcacagctttaccaggtatccagagc
gggtggagcgcctcattttccaggagggagatctgtgtgtgggcgggaaccaccgtcacg
ctgccctgtcgctatgactacccgtcaggtcacacggtgacgcgggtcatgtggttccga
gtgtccgcagaaggccgcagggcgttcgctcaccacaccgaccccaacgagatcagcctg
tcgtaccgcggacgcacccgctacatcggagggagctactccagctgctcggtccagatc
cggcaggtcgggctgagcgacgccggccagtaccacttccgctttgagacggaccaaccg
ctggggaggtggacctccccgagcaccatcgctctcgatgtcacagacctgcaggtccag
gtccagccggcccggcccgcccacatgatggtctccggggagacggtgttcgtgggctgc
cgggcccgcggctgtgcggcccccgggaggagcctggccctctacaggagcggtcagaac
ctcggctccttcgacacgtggatgaccatcgccggcttcgccgagcggcacaccggagcc
tacgcctgccgacccgtcccgccgcagaacgtgcagtcgcccgccgtctggctggctctg
ggccacggtcccagctccacctccatagcagtctcccccgtgggggaggtttcagagggc
gggtcggtcactctgacctgcaggagtgacgccgctccgcccgtggagagctttgtgtgg
ttcaaagacatggcgagcgacagcatcccggacagcttcaggcctcagctccgtctgtct
cacctcaagtacaccgacagaggagaatacttctgtgtcgcccgcaacgctctgggcacc
gagcgctcgcgacctctgctgctcaatgtcacgtactccccgaagaacacgcgtgtgctg
ctgatgcctccggccgacatcagggagggctcctccgtgaccatgagctgtgagagccgc
gcccacccgccggccagcaggtatgcttggtaccgtatcctaggcgaccaggtgttgtct
agaggaacctccccctccgtggcgttcccctcggtccgcgctcaccacgccggtcagtac
ttctgtgaggccgggaaccgcttcgggtcgcagcgctcgcccaccgccacgctcaccatc
ctctaccctcctaagaacacgtccctcctggcccgtccctccagtgtggtggatgccggc
cgacctttgaccttgacctgcagcagccaggccaacccggccgtggacaacttcacgtgg
caccgcctgccgctggacggcggctcggtccaatcgtggggcggcaaggcccgccccgtc
ttcaccttcctggaggtcggccccggagagagcggccagtactactgcgaggcccggaac
cggatcggcgcccacagctcgccggtgctgaccgtacgcgtcagaggtcgtctgaaggtc
atcgccttggcgtcggcggtcggggtgtctgcgggtctcatcactctcactgtggccatc
atgatcagtaagaacatgcacaaagtggacacggaggcagcagacaacaagcgcccctca
gtggatgatgacaccttgttctttgagtcgacccaacagaactttccagtgagaatgatg
tccgacatcccggaggagccagaggacttgagtgacagcgcccaccctgccattgttcct
ctgaaggatgctccaccaatcacagcagttgaaactcatagccccgcctccaactacttg
gctgtccacaactccaagttgtccagcgtggaccaggtgcaggtccacaacctgccgcta
ggtggtgacagaaacccgacggactcctccggagttgtctacacgttactgcagcagcct
cgcctctga
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