Pseudoliparis swirei (Mariana hadal snailfish): 130213367
Help
Entry
130213367 CDS
T09868
Name
(RefSeq) zinc finger protein 236-like isoform X1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-C2HE
zf-H2C2_5
zf-Di19
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
130213367
NCBI-ProteinID:
XP_056300906
LinkDB
All DBs
Position
22:complement(21261147..21317819)
Genome browser
AA seq
1834 aa
AA seq
DB search
MPRGRPRKLRVKSNDETDADPGEGKGESFSDGELKEKKCTICGHIFTTESQLQRHLREHE
VNDKPHRCDQCSQTFNVEFNLTLHRSTHATVDFTCPVCHKRFSRIASLKSHIMLHEKEEN
LICVECGDEFILQSQLSLHLDEHRTELSGVKVYTCKTCDKEFKTSAHLKEHMKSHVKMRP
LSSSSRNYKKNIDRSAFQNGCHHCGKAFKKPSQLVRHIRIHTGERPYKCPRCGKAFNQKV
VLQTHMVRHTGEKPHLCMFCPASFSQKGNLHSHVQRVHSEAKGVPLFPCMDCSCVFKKLG
SLNAHISKMHISVIELPSSTSEMEVTGQAPEGVEAVTDVIQQLLELSEQVSGETDQPQPP
EPAVAMETAINQDILQQALENSGLSVVQPQSDGTARESHDQNHDDGAGESKRAQGPDRPA
REKKRSIFKKPIQMPGSIREENGVRWHGCPYCSKEFKKPSDLVRHIRIHTHEKPFKCKQC
FRAFAVKSTLTAHMKTHTGIKAFECQCCLKCFSTSGSMKVHMRLHTGVRPFPCPHCDKIF
RTSGHRKTHIASHFKSLQQKKHKFPRKTNKAKVSKSHLPLPDIPLQEPILITDFGLIPSQ
NHRLAFQQYLEVVGSDRPYKCQFCSKAYKKSSHLKQHVRSHTGERPYKCVQCSRGFASSG
VLKAHIRTHSGLKAYKCLMCDTTFTTSGSLRRHTTTHSDLRPYMCPYCQKTFKSSPNCRK
HMKTHRYELAQQLQPQSTDDPLGGGTVDHDMQVEIEGDSLQQPPATSEEQQSMLGLGQPE
DVNGGQQVSLEAPLNDQPLVQGDDSYVTAQHSLPENIGQFETQALSQPAFDQQALTQGFT
ITESSYSQSQFSTVQQLQDSSTLESQALSSSYHPPTLLHVASAEVTNGLLQQSSQDELQL
ASEAQDYQDDSEDNSKRAYRCNWCNKGFKKSSHLKQHVRSHTGEKPYRCHLCGRAFVSAG
VLKSHLNTHTGVKPFKCNVCDASFTTNGSLNRHMIIHIKSFKCSVCDGSFRTSLLCKKHM
KKEHAVEDQIIGLDSQDVEEEEEDEEEEEDEDDEDEDAELKSKRRGLEIITFTEEQTAEL
AKDPGEEASVSERILAQSAAERDRISEIKDKAVELETEPKFANCCNFCPKSFKKPSDLVR
HIRIHTGERPYKCDECGKSFTVKSTLDCHVKTHTGQKLFSCHMCNTSFSTKGSLKVHMRL
HTGSKPFKCPFCELRFRTSGHRKTHIQCHFRPSLDSRRSKRLALSAGQGHDPETGQALGL
GQGGQQQQVSSDVLQPVGLLQASSSDPNIYLPANQVLTGQFDQSLLPPGLVGQASMSAAG
DLTVSLPEGLTTLDGIHLQLTPASLVCPNVQISGLDTSNINNITLQIDHALLQQTLQQGG
LLSQPLTVDAGLISHSGNQLLSAADPSVSANVVLHPLTSLALQPSAITPTQVTMAGLSEQ
DVAGSQGLSHVIGSSGLVTGGPSGQEITLTINNSSLTQALAQVQAHASAAGGNTAAGNPQ
EITLTISGQDLLPQHGHANGAEMTGSLRLASALAGQPTGATLTITDGHLLPHCPANTGMS
VSSLPPSTTLSHAAVSQSLVMSPGGVAGEDSVTLTLADAQGMLDGVTLSLNAQGQTFPAV
LNDPGQQVILITDVVHKGSKAVQAEADSRNQCYYCSLLCQNANTLRRHCRQAHGKDRCHV
CSLCNKAFKRATHLKEHERVHQPGPSPSSQKPRVFSCSSCVKAFAKRSQLERHNRTHTGE
RPFKCSQCDKAFNQKSALQVHMVKHTGKKPFKCEVCSIRFTQKSNMKHHMKRSHGYGQIQ
DMCLGQEDPAHQVTTELDLEVVPEASGDWHHVFP
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggccggcctcgcaaactgagagttaaaagcaacgacgaaacagatgccgat
cccggggaggggaagggggagagcttcagcgatggagaactcaaggagaagaagtgcacc
atctgcggccacatcttcaccactgagagccagctgcagaggcacctccgggagcacgag
gtcaacgacaagcctcatcgttgtgaccagtgctctcagacattcaacgtggagttcaac
ctcacgctccaccggtccacgcacgccaccgtggacttcacctgccccgtttgccacaag
cgcttctcgcgcatcgccagcctcaagtctcacatcatgctgcacgagaaggaggagaat
ttgatctgcgtggagtgcggcgacgagttcatcctccagagtcagctgtcgctgcacctg
gacgagcaccgcacggagctgtcgggcgtcaaggtgtacacgtgcaagacctgcgacaag
gagttcaagacgtccgcgcacctcaaggagcacatgaagagccacgtcaagatgaggccg
ctcagctcgagctcccggaactacaagaagaacatcgaccgcagcgccttccagaacggc
tgccaccactgtggcaaggctttcaagaagcccagccagctcgtccggcacatccgaata
cacacaggtgagaggccctacaagtgcccgcgctgcggaaaggccttcaaccagaaggtg
gtgctgcagacccacatggtgcggcacacgggagagaagcctcacctctgcatgttctgc
ccggcgtccttctcccagaaggggaacctgcactcgcacgtccagagggttcactccgag
gctaaaggcgtgccgctgtttccatgcatggactgcagctgtgtgttcaagaagttgggc
agtctgaacgcccacatcagcaagatgcacatctctgtcattgagctgccctcaagcact
tcggagatggaggtgacgggtcaggcgcccgagggcgtcgaggcggtgacggatgtcatc
cagcagctcctggagctctcggagcaggtcagcggggagacggaccagccccaacctccg
gagccggccgtcgccatggaaactgccatcaaccaggacatcctgcagcaagccctggag
aacagcgggctgagcgtggtgcagccgcagagcgacggcacggccagagagtcccacgac
cagaaccacgacgacggcgccggagaaagcaagagagcacaaggtcccgacaggccggcc
cgggagaagaaaaggagcatcttcaagaaacccattcaaatgccaggctccatccgggag
gagaacggcgtccgctggcacggctgcccgtactgctccaaggagttcaagaagccgagc
gacctcgtgcgccacatccgcatccacacccacgagaagccgttcaagtgcaaacagtgc
ttccgggcgttcgccgtcaagagcacgctcacggcgcacatgaagacgcacacgggcatc
aaggccttcgagtgccagtgctgcctcaagtgcttctccacttccggcagcatgaaggta
cacatgcgtctgcacacaggtgtgcgtccgttcccctgccctcactgtgacaagatcttt
cgtacgtcgggccacaggaaaacacacatcgcgtctcacttcaaaagcttgcagcagaag
aagcacaagttcccccgcaaaaccaacaaagccaaagtgtccaagagtcacctacctctg
cctgacatcccgctgcaggaacccatcctcatcacggacttcggcctcatcccatcccag
aaccatcgcctggctttccaacaatacctggaggtggtgggcagcgaccggccgtacaag
tgccagttctgcagtaaggcctacaagaagtcgagccacctgaaacagcatgtgaggtct
catacgggagaaaggccctataagtgtgtgcagtgcagtcggggttttgcctcctcggga
gtcctcaaggctcacatccggacccactcgggcctgaaggcgtacaagtgcctgatgtgc
gacaccacgttcaccaccagcggcagcttgcggcgccacacgaccacccacagcgacctg
cggccttacatgtgcccctattgccagaagaccttcaagtcatcgcccaactgcaggaag
cacatgaagacgcacaggtatgaactggcccaacagctgcagccccagtcaacggatgac
cccttaggggggggcacagtggaccatgacatgcaggtggaaatagagggagattccctc
cagcagccacctgctacctcagaggagcagcagagcatgctgggactgggacagccggag
gatgtgaacggaggtcaacaagtgtcattggaggcaccgctgaatgaccaaccccttgtc
cagggagacgattcgtacgtgaccgctcagcattctttgccggagaatatcggccagttt
gagacgcaggcgctcagccagcccgccttcgaccagcaggcgctaacacaaggcttcacc
atcacggagtccagctacagccagtcccagttctccaccgtgcagcagctgcaggactcc
agcaccctggagtcccaggccctgtcctccagctaccacccccccaccctgctccacgtg
gccagcgcagaggtgaccaatgggcttcttcagcagagcagtcaggatgagctccagctg
gcctctgaagcgcaagactaccaggacgacagcgaggacaacagcaagagggcctacagg
tgcaattggtgtaataagggcttcaagaagtccagccatctgaagcagcatgtgcgctct
cacaccggggagaaaccctacaggtgtcacctctgtggacgagcctttgtgtcggctgga
gtgctgaagtcccacctcaacacgcacacaggagtgaagccctttaagtgcaacgtctgc
gacgcctcattcaccaccaacggcagcctgaaccgccacatgatcatccacatcaagtcc
ttcaaatgctcggtgtgcgacggcagcttcaggaccagcctgctgtgtaagaagcacatg
aagaaggagcacgcggtggaggatcaaatcataggtctggatagtcaagacgttgaggaa
gaggaggaggacgaggaggaagaggaagacgaagacgacgaggacgaggacgcggagctg
aagtcaaagaggaggggcttggagatcatcacgttcaccgaggagcagacggcggagctg
gcgaaggaccccggcgaggaggcgtcggtgtcggagcggatcctcgcccagtcggcggcg
gagcgggatcgcatcagcgagatcaaggacaaggccgtggagctggagacggagcccaag
ttcgccaactgctgcaacttctgccccaagagcttcaagaagcccagcgacctcgtcagg
cacattcgcatccatacgggagaaagaccgtacaagtgtgacgaatgtgggaagagtttc
acggtgaagtccacgctggactgccacgtgaagacgcacacaggtcagaagctcttcagc
tgtcacatgtgcaacacctccttctccaccaagggcagcctgaaggtgcacatgcgcctc
cacacgggctccaagcccttcaagtgtcccttctgcgagctccgcttcagaacctccggc
caccgcaagacccacatccagtgccacttccggccgagcctcgacagccgccggtccaag
cggctcgccctgtccgcgggtcagggtcacgacccggagacggggcaggccctgggactg
ggccagggggggcagcagcagcaggtgtcttcagacgttctccaacccgtgggtctgctg
caggcgtccagctccgaccccaacatctacctcccggccaaccaggtgctgacgggccag
tttgaccagagtctgctgccccctggactggtgggacaggcctccatgtcagctgcagga
gacctgacggtgtctctccccgagggcctgaccacgctggatgggatccacctgcagctg
acgcctgccagcctggtttgccccaacgtccagatctccggcctcgacaccagcaacatc
aacaacatcacgctccagatcgaccacgccctcctccagcagaccctgcagcaaggcggc
ctcctctctcagcccctgaccgtcgacgccggcctcatctcccactcgggcaaccagctc
ctgtcggccgccgacccctcggtgtccgccaacgtcgtcctccacccgctgaccagcctg
gccctgcagccctccgccatcacgccgactcaggtcacgatggccggcctctctgagcag
gacgtggcaggttctcagggcctgagccacgtcattggcagctccggactggtcactgga
ggccccagtggacaggagatcaccttgaccatcaacaattccagcctgactcaagccctc
gcccaggtccaggcccacgcctccgctgctggcggcaacaccgcagcaggaaaccctcag
gagatcaccctcaccatatcaggtcaggatctgctcccgcagcacggccacgccaacggg
gccgagatgaccggcagcctccggctggcgtcggcgctcgccggccagcccaccggcgcc
accctgaccatcaccgacggccacctcctacctcactgccccgccaacaccgggatgtcg
gtctccagcctgccgcccagcaccaccctctcgcacgccgctgtgtcccagagcctggtg
atgtcaccggggggcgtcgccggcgaggacagtgtgactctgacgctggccgacgcccag
gggatgctggacggtgtcacgctcagcctcaacgcgcagggtcagacgttccccgcggtg
ctgaatgacccgggccagcaggtcatactgatcaccgacgtcgtccacaaggggtcaaag
gccgtccaggcggaggccgacagccgtaaccagtgctactactgcagcctgctgtgccag
aacgccaacacgctgcggcgccactgtcgccaagcgcacggcaaggaccgctgccacgtg
tgcagcctgtgcaacaaggccttcaagagagccacgcacctgaaggaacacgagcgagtg
caccagccgggcccgtctcccagctcccagaagccccgggtcttcagctgctcgtcgtgt
gtgaaggccttcgccaagcgcagccagctggagagacacaaccgaacgcacacaggcgag
cggcccttcaagtgcagccagtgcgacaaggccttcaaccagaagagcgccctgcaggtc
cacatggtgaagcacacggggaagaagcccttcaagtgcgaggtgtgcagcatccgcttc
acccagaagagcaacatgaagcaccacatgaagaggtcccacggctacggtcagatccag
gacatgtgcctgggccaggaggacccggcgcaccaggtcaccaccgagctggacctggaa
gtggttcccgaggcgtcgggggactggcaccacgtcttcccctga
DBGET
integrated database retrieval system
