Pseudoliparis swirei (Mariana hadal snailfish): 130213400
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Entry
130213400 CDS
T09868
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130213400 (rbfox1l)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130213400 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
130213400
NCBI-ProteinID:
XP_056300973
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All DBs
Position
22:13910709..13922293
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AA seq
383 aa
AA seq
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MLSSPTVILQPYGLPMYPQTSACYPSIVQGGPSQEVGLGGGDPALSQVYAPPPSYPPPGQ
GPPTSAGRLPPLDFTSAHHSSEYPEHPQLRIYQGPQLDGAEALISSNTEDALATLTSDPQ
SLSVSVSSGGGAGSGSDEEGSNKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFETASEADRAREKLNSTIVEGRKIEVNNATARVVTKKPQTPLVNGDIA
SSGWKINPIMGAMYAPELYTVASFPYPVAAPALAYRGCALRGRGRAVYNTIRSAAAAPAA
VPAYPQMVYHEGLYGPEVFGGYPAAYRVAQSASAATATYSDGYGRIYTAAADPYHHSVGP
TATYGVGTMASLYRGGYNRFTPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctcacccactgtgattctccagccttatggactccccatgtacccacagacc
tccgcatgctaccccagcatagttcagggaggcccctctcaggaggtcggcctcggcggc
ggggaccccgccctgtctcaggtctacgcgcccccgccctcctacccgccccctggtcaa
ggcccaccaacatcagcgggcagactgccgcctcttgattttacctctgcccaccacagt
tccgagtaccccgaacatccccaactgagaatataccagggccctcagctggacggggcg
gaggctctgatatccagtaacacggaggacgctttggccactttgacctctgacccccag
tctctgagcgtgtctgtgtcatcagggggcggagcaggaagtggaagtgatgaggagggt
tcaaataaggcccaaccgaaacgcctccatgtctccaacatcccgtttcgcttccgagac
ccggacctccgccagatgtttgggcaatttgggaagatccttgatgtagaaataatattc
aacgagaggggttccaagggttttggatttgtcactttcgagaccgcgagtgaggctgac
cgagcaagagaaaagctgaatagcacgattgtggaggggaggaagattgaggttaataac
gccactgcaagagtagtgaccaaaaagccccagacgcctcttgtgaacggggacattgca
agttctgggtggaagatcaaccccatcatgggggcgatgtacgcgccagaactctataca
gttgccagtttcccgtatcctgtagcagctcccgccttggcctaccggggctgcgcgctg
cgcggccgcggccgggccgtctacaacaccatccgctctgctgcggctgcgcctgctgct
gtgcccgcctacccccagatggtgtatcacgaaggactgtacggaccagaggtctttggt
ggctaccctgcggcgtatagagtggctcaatcagcatctgctgccaccgcaacctacagt
gacggatacggacgcatttacacggcagctgcggatccctatcaccactcggttggacca
acagcgacatatggagtgggtacaatggccagcttgtacagaggaggatataaccgcttc
accccgtactga
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