Psychromonas sp. CNPT3: PCNPT3_03380
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Entry
PCNPT3_03380 CDS
T02515
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psy03019
]
PCNPT3_03380
03009 Ribosome biogenesis [BR:
psy03009
]
PCNPT3_03380
Messenger RNA biogenesis [BR:
psy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCNPT3_03380
Ribosome biogenesis [BR:
psy03009
]
Prokaryotic type
rRNA processing factors
PCNPT3_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AGH80618
UniProt:
M4U2J8
LinkDB
All DBs
Position
806354..807826
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AA seq
490 aa
AA seq
DB search
MSVELLMNITPTETRVALIEGGVLQELHIERQGTKGIVGNVYKGKVCRVLPGMQAAFVDI
GLEKAAFLHASDIVPHTECVAQTEKVKFKVADISELVRQGQDIMVQVVKDPLGTKGARLT
TDITVPSRYLVFMPGSSHVGVSQRIASSSERDRLKAITQTCINELGGFIIRTAAEGAPEN
ELTHDAAFLQRVWAKVLKRRARFKSKNKLLYQDLGLAFRILRDFVGTEIDRVRIDSKLKF
TELQKFTHEFVPELEDKIEYYSGESPIFDLFDAENEVQRALERKVELKSGGYLIIDQTEA
MTTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIILDFIDMQSNDHKRR
VFTSLELALSKDRVKTHINDFSPLGLIEMTRKRTQESLEHIFCSPCEQCNGRGYVKTVET
VCYEVLREILRVNRAYDAEHFAVYTSPAVADALRGDESHSLGELILFMSKEVTIYAEPLY
GQEQFDVVMM
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgaattattaatgaatattacgcctacagagacgcgtgtggcattgatagaa
ggtggcgtattacaagaactacatattgaacgacaaggtactaaaggcattgttggcaat
gtatataaaggtaaagtctgtcgcgttctaccaggaatgcaagcagcttttgtggatatc
ggtttagaaaaagcagcctttttacacgcgtcagatatcgtgccacacacagaatgtgtt
gcacaaacggaaaaagttaaatttaaagttgctgatatttctgaattagtgcgccaaggt
caagatataatggtgcaagtggttaaagatccactcggcacgaaaggtgctcggctaaca
accgatattaccgtcccttctcgataccttgtttttatgcctggtagttcacatgtgggt
gtttcacagcgcattgcaagttcctctgaacgcgatagattaaaagcgattactcaaacc
tgtatcaatgaattaggtgggtttattatccgcactgcagccgaaggcgcgccagaaaat
gaattaacacatgatgctgcatttttacaacgcgtatgggcaaaagtacttaaacgtcgt
gcccgctttaaatctaaaaacaaattactgtatcaagatttagggttagcttttcgtatt
ttacgcgactttgttggcacagaaatcgacagagtgcgtatcgattcaaaattaaaattt
actgaactacaaaagtttactcatgagtttgtgcctgagcttgaagataaaattgaatat
tattcgggtgaaagtcctattttcgacctatttgatgcagaaaatgaagtgcaacgtgca
ttagagcgaaaagtagaactgaaatcaggtggctatttgatcattgatcaaaccgaggcg
atgaccactgtcgatattaataccggcgcttttgttggccaccgtaatttagaagaaact
atttttaataccaatattgaagcaacgcaagcgatagcgcgtcaactaaggttacgtaat
ttaggcgggatcattattcttgattttattgatatgcagtcgaatgatcataagcgtcgt
gtttttacaagcttagagctggcgttgagtaaagatcgcgttaaaacacatattaatgat
ttttcaccccttggtttaatcgaaatgacgcgtaagcgcactcaagaaagtcttgagcat
attttttgtagcccatgtgagcaatgcaatggtcgtggctatgtgaaaacggttgaaacg
gtatgttatgaagttttgcgtgaaatattgcgtgttaaccgtgcttatgatgctgaacac
tttgctgtttatacctcacctgcagtagcagatgcactgcgtggtgatgaatctcatagt
ttgggtgaacttatcttatttatgtctaaagaggtgactatttatgccgagccactttac
ggtcaagagcagtttgatgtggtcatgatgtaa
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