Desulfovibrio mangrovi: N1030_17105
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Entry
N1030_17105 CDS
T08614
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf00300
Lysine biosynthesis
psyf00550
Peptidoglycan biosynthesis
psyf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N1030_17105
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N1030_17105
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyf01011
]
N1030_17105
Enzymes [BR:
psyf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
N1030_17105
Peptidoglycan biosynthesis and degradation proteins [BR:
psyf01011
]
Precursor biosynthesis
Amino acid ligase
N1030_17105
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
UZP67291
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Position
3829602..3831050
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AA seq
482 aa
AA seq
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MTQVITLEQLADQVRTGLITLHTDSRKVMPGDVFIAVPGASMDGGDFIGDALDKGAAYVV
CRERSMPEDGADARFVIHEDPQAALGILAGIKFSTEELVFPVVGVTGTNGKTTVTYMLEH
LFNAAGRRAGVIGTVSYRWPGTELEAKMTTPDCLKVHALLARMAAAEVDGVFMEVSSHAL
DQNRTAGVEYSGAILTNLTQDHLDYHGDMETYFQAKRLLFTSVPKAGKACVVNVDDPYGR
RLLPELPNGIGFTLHDVTIEGCRILKGEVLSCTVDGLHLRMTLDGESWELVSPMVGYHNA
SNLLGVQGMGRMLGLSAEDMRGLEGFNGVPGRLERIPNSKGVHAFVDYAHTPDALENVLT
ALRKVGFERIITVFGCGGDRDRRKRPLMAEAVCHHSDVAVLTSDNPRTEDPLAILEDVKP
GLIGCAHVLIDPDRKAGIALAVADARPGDCILVAGKGHEDYQIIGTEKFPFSDQAVLKEL
LG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggttattacgttggaacagctggcggatcaggttcgcaccggattgatcacc
ctgcatacggattctcgcaaggtcatgcccggtgatgtattcattgccgttcccggcgca
tccatggatggcggcgactttatcggcgacgccctcgacaagggcgcggcatatgtcgtt
tgccgcgaacgcagcatgcccgaagacggagcggacgcccgtttcgtgattcatgaagac
ccgcaggccgctcttggcattctggcgggcatcaagttcagcacggaagaactggtgttc
cccgtggtgggggtgaccggcaccaacggcaagaccacggtgacctacatgctggaacat
ctcttcaatgcagccggccgcagggcgggcgttatcggcaccgtcagctaccgctggccc
ggcaccgagcttgaagccaagatgaccaccccggactgcctcaaggtgcacgcgttgctg
gcgcgcatggccgcagctgaggttgacggcgtgttcatggaggtctcttcccacgcactg
gaccagaaccgcacggcgggcgtggaatactccggcgccatcctgaccaacctgacgcag
gaccatcttgattaccatggcgacatggaaacctattttcaggccaaacgccttctcttc
acctcggttcccaaggcgggcaaggcctgcgttgtgaacgtggacgacccctacggccgt
cgcctgctgcctgaactgcccaacggcatcggtttcacgctgcacgatgtgaccattgag
ggctgccgtattctgaagggtgaggttctctcctgtaccgtggatggtctgcacctgcgc
atgactcttgatggcgaaagctgggaactcgtttctcccatggtcggctatcacaacgct
tccaacctgctgggcgtgcagggcatgggccgcatgctcggcctctccgcagaggatatg
cgcgggctggaaggcttcaacggcgtccccggtcgccttgagcgcattcccaacagcaag
ggcgtgcatgcctttgtggactatgcccacactcccgatgcgctggagaacgtgctgacg
gcgctgcgcaaggtcggattcgagcggatcattaccgtgttcggttgtggcggcgatcgc
gacagacgcaagcgtccgttgatggcagaggccgtatgccaccattccgacgtggctgtg
ctgacctctgacaacccccgcaccgaagacccgctggccattctggaagacgtgaagccg
gggcttatcggttgcgcccatgtacttatcgaccctgatcgcaaggcgggcatcgcgctt
gccgtggcggacgcccgtcccggcgattgcattcttgtcgcgggcaagggtcacgaagac
taccagataatcggtacggaaaaatttcctttcagtgaccaggccgttttgaaggagttg
ctcgggtga
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