Pseudomonas syringae pv. tagetis: MME58_25245
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Entry
MME58_25245 CDS
T08245
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00521
Streptomycin biosynthesis
psyi00523
Polyketide sugar unit biosynthesis
psyi00541
O-Antigen nucleotide sugar biosynthesis
psyi01100
Metabolic pathways
psyi01110
Biosynthesis of secondary metabolites
psyi01250
Biosynthesis of nucleotide sugars
Module
psyi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MME58_25245 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MME58_25245 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MME58_25245 (rfbC)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MME58_25245 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UNB68437
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All DBs
Position
5635739..5636284
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AA seq
181 aa
AA seq
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MNVVATKLPEVLILEPKVFGDDRGFFYESFNARAFQEATGLTRQFVQDNHSRSQQGVLRG
LHYQIENVQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGF
VVLSEHAEFLYKTTDYYTPSAERCIAWDDPELAIDWQFAGNPSLSAKDQQGKSLKEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtagtcgcaacaaaattgccggaagtcctgattctggagcccaaggtattcggt
gatgatcgaggctttttctatgagagcttcaacgccagggcttttcaggaagccaccggc
ctgacacggcagttcgtgcaggataaccactcgcgctcgcaacaaggcgtactgcgcggc
ctgcattatcagatcgagaatgttcagggcaaactggtgcgtgtcactgtcggcaaggtg
ctcgacgtggccgtggacatccgccgcagctcgccgaacttcggtcagtgggtcggcgtg
gagctgtccgctgaaaacgcccgccaactgtgggttccggaaggctttgcgcatggcttc
gtggtactgagcgagcatgccgagttcctgtacaagaccactgattactacacgccatca
gccgagcgttgcatcgcctgggacgacccggagctggccatcgactggcaattcgctggc
aaccccagcctgtcggccaaggatcagcaaggcaaaagcctgaaagaagccgatctgttt
ccttga
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