Psychrosphaera ytuae: J1N51_10410
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Entry
J1N51_10410 CDS
T07123
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
psym
Psychrosphaera ytuae
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psym03016
]
J1N51_10410 (trmA)
Enzymes [BR:
psym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
J1N51_10410 (trmA)
Transfer RNA biogenesis [BR:
psym03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
J1N51_10410 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_4
Methyltransf_11
Cons_hypoth95
Met_10
DREV
Methyltransf_12
PrmA
TRM
DUF6816
Motif
Other DBs
NCBI-ProteinID:
QTH63154
UniProt:
A0A975DA68
LinkDB
All DBs
Position
complement(2331968..2333065)
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AA seq
365 aa
AA seq
DB search
MPLDTIKPEQYEELLDQKIVGIKEQFAEFDIPAIDVFTSPKLSYRMRCEFRVWHEGDDLF
HIMFDKETKEKVRIDHFPPASKLIDQVMKDLIDELKPNEILRRKLFQIDYLSTLSGEILV
SLLYHKQLDDQWIDACKTLKAKLGSKYKIDFVGRARKQKVILDRDFVIETLSVDGKEYIY
KQVENSFTQPNAVVCEHMLSWAKNAKEYKGDLLELYCGNGNFSLALADKFERVLATEISK
TSVNAAQYNIKANNIENVDIIRMSAEEFTEAMNGTRTFNRLEGIDLKSYNCETIFVDPPR
AGLDEETVKMVQAYPTIIYISCNPDTLHENLKELAKTHKVEKFAVFDQFPYTHHLECGVV
LSKRD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcctttagatacgatcaagccagaacagtacgaagaattattagatcaaaagatagtt
ggtataaaagaacagttcgctgaatttgatattccagctattgacgttttcacatcacct
aagcttagttatcgcatgcgatgtgagtttagagtctggcacgaaggtgatgatttgttt
cacatcatgttcgacaaagaaaccaaagaaaaagttcgaatcgatcactttccaccagcg
agtaaacttatcgatcaggtaatgaaggatcttatcgatgagctcaagccaaatgagatc
ttaagacgtaaactatttcaaattgactacttgtctaccctttcaggcgagatcttggtt
agcttgctttatcacaagcagttagatgatcagtggattgatgcctgtaaaacattaaaa
gctaaactaggatctaaatataagatcgactttgtaggtcgggcacgtaagcaaaaagtg
atcttagatcgcgactttgttattgagactttaagcgtcgatggcaaagaatacatatat
aagcaggttgaaaatagttttactcaacctaatgccgtagtttgtgagcacatgttgagc
tgggctaaaaacgcaaaagaatataaaggtgatttattagagctttattgcggtaatggt
aacttctccctagcactagccgataaatttgaacgcgttttggcgaccgaaatatcaaaa
acttcggtaaatgctgcgcaatacaatattaaagcgaataatatcgaaaacgtagacatt
attcgaatgtcagctgaagagttcaccgaggcgatgaatggcacgcgcacatttaaccga
ttagagggcatcgacctcaagagttacaattgtgaaaccatctttgtcgatccaccaaga
gccggtcttgacgaagagacagtaaaaatggttcaagcttatccaaccattatctatatt
tcatgtaacccagatacactgcatgaaaatctgaaagagctagcaaaaactcataaagtt
gagaagtttgctgtgtttgatcagttcccttatacccatcatttagagtgtggtgtagtc
ctgtcaaaacgtgactaa
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