Psychroserpens sp. NJDZ02: E9099_06935
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Entry
E9099_06935 CDS
T05945
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn00521
Streptomycin biosynthesis
psyn00523
Polyketide sugar unit biosynthesis
psyn00541
O-Antigen nucleotide sugar biosynthesis
psyn01100
Metabolic pathways
psyn01110
Biosynthesis of secondary metabolites
psyn01250
Biosynthesis of nucleotide sugars
Module
psyn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E9099_06935 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E9099_06935 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E9099_06935 (rfbC)
Enzymes [BR:
psyn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E9099_06935 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCE41163
UniProt:
A0A4P7WVL1
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Position
complement(1582260..1582799)
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AA seq
179 aa
AA seq
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MQAIETKLKGCFVLEPTVFGDSRGYFFESYNKHIFDKLINQNITFIQDNESYSSKGVLRG
LHNQRGEYSQAKLVRVTQGEVLDVAVDFRPDSATYLQHVSVKLSSENKKQLFIPRGFLHG
FVVLSETAVFNYKCDNWYQKEAELGVIYNDPKLNIDWLLDDSVLLISEKDKVLPTVSNI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaatagagactaaattaaaagggtgttttgtcttagagccaaccgtatttggt
gactctagaggttatttttttgaaagttataataaacatatatttgataagcttataaat
caaaatataacttttattcaagataatgagtcgtattcaagtaaaggagtacttagaggt
ctacataatcagagaggggaatattctcaagctaaattagtaagagtgacacaaggtgag
gtgttagatgtggctgttgattttagaccagactccgctacttatttacagcacgtgtca
gtgaaattatcatctgaaaataaaaagcagttatttatacctagaggatttttacatggt
tttgttgttttaagtgaaaccgctgtttttaattataaatgtgataattggtatcaaaaa
gaagctgaattaggtgtgatttataatgatcctaaacttaatattgattggttattagat
gatagtgtacttttgatatcggagaaggataaggtactaccaacagttagtaatatttag
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